Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_1174 |
Symbol | |
ID | 8376838 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | + |
Start bp | 1288974 |
End bp | 1289657 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 645000407 |
Product | ThiJ/PfpI domain protein |
Protein accession | YP_003157694 |
Protein GI | 256828966 |
COG category | [R] General function prediction only |
COG ID | [COG0693] Putative intracellular protease/amidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.64094 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATTC TTATTGTTCT TACTTCTCAT GACCAACTTG GCAACACCGG AAAGAAGACT GGTTTCTGGC TGGAAGAGTT CGTGTCTCCC TATTACGTGT TCAAGGATGC CGGAGCAAAG ATCACGCTGG CCTCGCCCAA GGGGGGCCGA CCGCCGCTTG ATCCGACCAG CGAACTTCCC GAATATCTGA CCGAATCAAC CAAACGCTAC AGCAAAGACA AGGCTGCGCA GGCTGAACTT GCTGACACGA AAAAGCTAGC CGATGTGTCC GCGGACGATT TCGACGCAGT CTTCTACCCC GGCGGTCATG GTCCGATGTG GGACCTTACC GATGACAGGG TCTCCATTGC GCTGATCGAA GCCTTCCTAC AGGCCAACAA GCCGGTCGGT GCGGTGTGTC ACGCGCCGGT CTCGTTAGTC AATGTACGCG GGAAAGACGG CGAATATCTG GTCAAAAGTA AACGCGTAAC CGGTTTCACC AATACAGAAG AAGAAGCAGC AGGCTTGACC GAGGTCGTAC CTTTTCTGTT GGAAGACCGA CTTAAAGAAC GCGGTGCTCT CTACAGCAAG GGTGCCGACT GGGCGCCGTA CGTACAGGTG GATGGCAAGC TTGTGACCGG CCAGAACCCG GCCTCCTCGA GACCCGCTGC GGAAGAGGTG CTGAAGCTGC TTCGTTCTGC TTGA
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Protein sequence | MKILIVLTSH DQLGNTGKKT GFWLEEFVSP YYVFKDAGAK ITLASPKGGR PPLDPTSELP EYLTESTKRY SKDKAAQAEL ADTKKLADVS ADDFDAVFYP GGHGPMWDLT DDRVSIALIE AFLQANKPVG AVCHAPVSLV NVRGKDGEYL VKSKRVTGFT NTEEEAAGLT EVVPFLLEDR LKERGALYSK GADWAPYVQV DGKLVTGQNP ASSRPAAEEV LKLLRSA
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