| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1148 |
|---|
| Symbol | |
|---|
| ID | 8376812 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | + |
|---|
| Start bp | 1256056 |
|---|
| End bp | 1258008 |
|---|
| Gene Length | 1953 bp |
|---|
| Protein Length | 650 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 645000381 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer with Cache sensor |
|---|
| Protein accession | YP_003157668 |
|---|
| Protein GI | 256828940 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.605213 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAGCA TCCCTATTCG CATGAAATTG ATCGGCGGTT TTCTGGCCCT GTTGATCCTG
GTCTGCACAG GTCTTGGTTT TATCGCTTAT GACCGGGCCA AAAGCGCGTC ATTAAGCCAG
GTGCAGGAGA ACATCCAGCT CATGGCCCAG GACGGGGCCC GGCTGGTCAG GAGCCGACTT
GATTTTTTCC TCATGGGCCT GGAGGGGATC GCCAACCGGG ACGTGATCCG TTCCATGAAC
TGGGACCGTC AGTTGCTCAC CCTCGAACGT GAAATCGAAC GGATGAAATA TCTGGGGATG
GGCGTCATCG ATGCGGACGG CCAGGCCAAG TATCCCGACG GCTCCACCGC GGACCTGAGC
GACCGGGCGT ATTTCAAGGA GGCCATGGCC GGAAAGTCCG TGCTCTCCAA CGTCATCATC
AGCCGGGTCA CCAACTCGCC GGTCATCATT CTGGCCACGC CCATCAGGGG GTTCGCGGGA
GATGTCAAAG CCGTGCTGCT GGCCCGCCTC GACGCCACCA TGCTCAGCGA GATCACGGAC
AACATCAAAT ACGGGGACAC CGGGTACTCC TACATCATTG ACGGCACGGG CGTGCTCATC
GCCCACGGCA ACCGTCAGTT CGTGCTCGAT CAGCGCAATT TCGTCGAAGA GGGCAAGAAG
GATCCTCAAT ATGCATCTTT GGGGGCCATG TTTCAGCGCA TGATGAAGGG TGAGATCGGC
TTTGACCAGT ACCCCTTCAT GGGCTCCGAC CGTTTCTTCG GGTTCGCGCC CATCGAGAAC
ACCGGGTGGT CCATTGCCGT GGGTGCCATG CAGGACGATG TGCTGACAGA GGTGTACAGG
ATGCGATGGA TGATCGGGCT GGCCTCCCTG GCCTTTTTCG CCGTGGGTAT CGCCATCGCG
CTTTTGATCA GCCGGGCCAT CCTGCTGCCG GTGAAAAACT GCGTCGATCT GCTCAGGGAT
ATCTCCGAGG GAGAAGGCGA CCTGACCAAG CGGCTTCCGG TGGAAAGCAA TGATGAAATT
GGTCAGTTGG CGCAGCACTT TAATACATTT GTTGAAAAAC TGCAGCGCAT CATCGCTGAA
ATCAGCGGCA ACGCCCAGAC CGTGGCCTCC TCCGCCACGG AGCTTTCGGC CGTGAGCAAG
CAGACGACGC AGAGCGTGCA GTCCCTTTCC TCCAAGACAT CCACCGTGGC CACGGCCGCA
GAGGAGATGA GCGCCAATAT CACCTCCGTC GCCGCAGGCA TGGAAGAGAC CACCACCAAT
CTGTCCTCGG TGGCCGCAGC CACGGAAGAA ATGACTTCGA CCATCGGCGA GATCTCCGGC
AACACCGAAC GCGCCCGGGG CACCACCGAC AACGCCGCAC GTCAGGTGGA TAATTTCGCA
GGCATTTTAC GCGATCTTGG TGCTTCCGCC CAGGAAATCG GCAAGGTCAC CGACACCATC
TCCGCCATCT CTTCACAGAC GAACCTGCTG GCTTTGAATG CCACCATCGA GGCGGCCAGG
GCCGGTGAGG CAGGCCGGGG CTTTGCCGTC GTTGCCAACG AAATCAAAGA GCTGGCAACG
AAGACCGCCG AGGCCACCAA CGACATCCGG ACCAAGATCA ACGGCATCCA GAATGCCACG
GGCAGCGCCG TGACCGACAT CGGTCAGATC GTGAAGGTCA TCGGCGATGT GAACGAAATC
GTGACCACCA TCGCCGCCGC CATCGAGGAG CAGTCCGCCG TGACCCGCGA AGTGGCTACC
AACATCAACC AGGCCACCAC CGGCGTACAG GACGCCTCGG TGCGCGCCTC GGAGATGTCC
GGAGTGTCCA GGGATATCGC CCAGGACATT ACGGCCGTGG ACTCCATCAC CGGCGACATC
CGCTCCGGCG GCGAGCAGGT CCAGGCCAGC GCGGAGGAGC TCTCCAAACT GGCCGAACAG
CTCAAGGGGC TGGTCGGCCA GTTCAGGATC TAG
|
|---|
| Protein sequence | MKSIPIRMKL IGGFLALLIL VCTGLGFIAY DRAKSASLSQ VQENIQLMAQ DGARLVRSRL
DFFLMGLEGI ANRDVIRSMN WDRQLLTLER EIERMKYLGM GVIDADGQAK YPDGSTADLS
DRAYFKEAMA GKSVLSNVII SRVTNSPVII LATPIRGFAG DVKAVLLARL DATMLSEITD
NIKYGDTGYS YIIDGTGVLI AHGNRQFVLD QRNFVEEGKK DPQYASLGAM FQRMMKGEIG
FDQYPFMGSD RFFGFAPIEN TGWSIAVGAM QDDVLTEVYR MRWMIGLASL AFFAVGIAIA
LLISRAILLP VKNCVDLLRD ISEGEGDLTK RLPVESNDEI GQLAQHFNTF VEKLQRIIAE
ISGNAQTVAS SATELSAVSK QTTQSVQSLS SKTSTVATAA EEMSANITSV AAGMEETTTN
LSSVAAATEE MTSTIGEISG NTERARGTTD NAARQVDNFA GILRDLGASA QEIGKVTDTI
SAISSQTNLL ALNATIEAAR AGEAGRGFAV VANEIKELAT KTAEATNDIR TKINGIQNAT
GSAVTDIGQI VKVIGDVNEI VTTIAAAIEE QSAVTREVAT NINQATTGVQ DASVRASEMS
GVSRDIAQDI TAVDSITGDI RSGGEQVQAS AEELSKLAEQ LKGLVGQFRI
|
|---|
| |