Gene Dbac_1105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1105 
Symbol 
ID8376769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp1216681 
End bp1218132 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content61% 
IMG OID645000338 
Productglycine dehydrogenase subunit 2 
Protein accessionYP_003157625 
Protein GI256828897 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1003] Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAACCA TTTTCCAAGA TTCAGCCAAA GGCCGCGCCG GCGTGTGGCC CAAAGAGCCA 
AGGGGCAACA CGGAAGGCGA CATCCCCGCG CACCTGCTGC GCGGCAGTGC CCCGAAACTC
CCGGAGCTGT CCGAAATCGA CGTCATCCGT CATTTCACCA GGCTTTCGCG CCTCAATTAC
AGCGTGGACA GCAATTTCTA TCCCCTCGGG TCGTGCACCA TGAAGTACAA CCCGAAATTC
ACCGAGGCCG TGGCCGCCCA GCCCGGATTC ACCTCCGTGC ACCCGCTCAT CCCGCAGCTT
AAAGGGGCCG GGCATATGAC CCAGGGCGCC CTTGAAGTGC TGTACGAGAC CGAGCAGCTG
CTGGCCGAGA TCACCGGCAT GAGCGCCTTC ACCCTGCAGC CCATGGCCGG CGCCCACGGC
GAACTGACGG GCGTCATGCT CATGGCCGCC TACCACAACG ACAAGGGCAA CAAAAAGACC
AAGATCATCG TGCCCGACTC CGCCCACGGC ACCAATCCGG CCTCGGCGGC CATCGCCGGA
TACGACGTCG TGTCCATTGA ATCCAAAAAC GGGATGATCG ATCCCGACGA ACTGGAAAAG
GTGCTGGACG ACGAGGTGGC GGGCCTGATG ATGACCTGCC CCAACACCCT GGGGCTGTTC
GAGTGCGGCC TTGAACGCAT CGTCAAGCTG GTCCACGGCG TGGACGGACT GCTGTATTAC
GACGGCGCGA ACCTGAACGC CATCATGGGC AAGATGCGTG TCGGCGACGT GGGCTTCGAC
GTCGTGCACC TGAACCTGCA CAAGACCTTC GCCACCCCTC ACGGCGGAGG CGGGCCCGGC
TCCGGTCCGG TGGGCGTGAG TCAGCGTCTG GTGGACTATC TGCCCGTTTC GCGCGTGGTC
AAACTTGAGG ACGGCCAGTA CTACCTCAAC TACGACTACC CCAAATCCAT CGGCTACATC
GCGCCCTTCT ACGGCAACTT CGGGGTCATC CTGAAAGCCT ATGCCTACAT ACTGCGCCTA
GGGCGCGAAG GCATCGTGCG CGCCTCGGAA AACGCGGTTC TGGCCGCCAA CTACATGCGC
AAGCGCCTGG AAGATGTCCT TGAAATCCCC CACGACCGCA TCTGCATGCA CGAGTTCGTC
GCCTCGGCCG CGAAACAGGC CGAAAAGGGC GTACGCGCCC TGGATCTGGC CAAGGCATTG
CTGGACAAGG GACACTACGC ACCGACCATC TACTTCCCGC TCATCGTCAA GGAATGCCTG
ATGTTCGAGC CCACGGAGAC GGAAAGCAAG GAAACCCTGG ACGGATTCGT CGATGATCTG
ATCGAAATAC TTGGCCGTGT CGATACCGAT GCAGCATCGA TTCAAAATGC GCCCATAACC
ACACCAGTAG AACGCCTCGA CGAGGTTCGC GCAGCCAGAA GCATGGAGCT TGTGGACGAC
GCCGGACTCT GA
 
Protein sequence
MKTIFQDSAK GRAGVWPKEP RGNTEGDIPA HLLRGSAPKL PELSEIDVIR HFTRLSRLNY 
SVDSNFYPLG SCTMKYNPKF TEAVAAQPGF TSVHPLIPQL KGAGHMTQGA LEVLYETEQL
LAEITGMSAF TLQPMAGAHG ELTGVMLMAA YHNDKGNKKT KIIVPDSAHG TNPASAAIAG
YDVVSIESKN GMIDPDELEK VLDDEVAGLM MTCPNTLGLF ECGLERIVKL VHGVDGLLYY
DGANLNAIMG KMRVGDVGFD VVHLNLHKTF ATPHGGGGPG SGPVGVSQRL VDYLPVSRVV
KLEDGQYYLN YDYPKSIGYI APFYGNFGVI LKAYAYILRL GREGIVRASE NAVLAANYMR
KRLEDVLEIP HDRICMHEFV ASAAKQAEKG VRALDLAKAL LDKGHYAPTI YFPLIVKECL
MFEPTETESK ETLDGFVDDL IEILGRVDTD AASIQNAPIT TPVERLDEVR AARSMELVDD
AGL