| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1054 |
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| Symbol | |
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| ID | 8376715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | - |
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| Start bp | 1156025 |
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| End bp | 1157227 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 645000294 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003157583 |
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| Protein GI | 256828855 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.153115 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACACCG CACGCAAGCG CCGACCGTGG CGCATCCTCA TCCCCGTTCT CCTGATCCTG
GCCGCCCTGC TGGCCTACGG ATTTTGGCCA AGCCCCCTGC CCGTGCAGAC AGCCTCCGTG
GCCAAGGGAC CCATGACCGT CAGCGTGACC GAGGAGGGCA AGACGCGCAT CCACAGCCGC
TACCTTGTCT ACCCGCCCAC GGCCGGACAC CTGCAGCGCG TGGAGCTCCG CGCCGGGGCG
CGTGTGGAAG CCGGCTCCGT GCTGGCCGTG CTCACTCCGG AGGCTTCGAC CTTCCTGAAT
TCGCGTGCCA GAGCCGAGGC CCTGGCACGG GTGGACGCGA CCGAGGCCGC AGTCAAGGCC
CGACGGGCCG AGGCCCAGCG CGTGGGCGTG AGCCTGGAAC TGGCCCGCAC GGAGCTTGGG
CGCATGGACG CGCTGCTTCA AAGCGGGGCC GTGGCTCGCC AGGAATGGGA CCGGGCCGAA
AATCAGGTTC GAGTTTTGGA ACGCGGGGTG CAGGCCGCGG CCTTTGCCTT GCAGGTGGCC
GAACATGAGG CCGCAGCCGC CAGGGCCGTG CTGACCAAGG GCGCGATACC GGAGAACGGC
GAGAGCGTGC CCATCCTGGC CCCGGTGAAC GGATACGTGC TGGCCGTCAT GGAGGAAAAC
GCCCGCGCCG TGACCGCGTC CACGCCCATC ATGGAAGTGG GCGACCCAAG TGACCTGGAG
ATCGAAATCG AACTGTTGTC CACGGACGCG GTGGCGGTTG CTCCCGGAGC GCACGCCCGC
ATCGAGCACT GGGGCGGCGA AGGCAGCCTT GCGGCCAGGA TCACGGTGGT GGAACCCGGC
GGATTCACCA AGGTCTCGGC CATCGGCGTG GAGGAGCAAC GGGTCACGGT GCGGGCCGAG
CTCGTCGACG CCCCGCCGCC GGGAGTGCTG CTGGGAGACC GCTACGGAGT GCAGGCCCGC
ATCGTGACCT GGCAGGGGGA GAACGTGCTG CAAGTGCCCA CAGGCGCCCT TTTCCGGCAC
GGCGGCGAAT GGCGGGCTTT CGTGCTCGAA GGGGGCAAGG CGGTATTGCG AAAACTTGCC
GTCGGACGTG AGAACGGACT GGAAGCAGAG GTGCGGGAAG GCCTGGCCGA AGGCGAAACG
GTCATCCTCC ACCCGCCGGA TACGCTGAAG GACGGGATGC GGGTTGAGGC GGGAAAACTA
TAA
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| Protein sequence | MNTARKRRPW RILIPVLLIL AALLAYGFWP SPLPVQTASV AKGPMTVSVT EEGKTRIHSR
YLVYPPTAGH LQRVELRAGA RVEAGSVLAV LTPEASTFLN SRARAEALAR VDATEAAVKA
RRAEAQRVGV SLELARTELG RMDALLQSGA VARQEWDRAE NQVRVLERGV QAAAFALQVA
EHEAAAARAV LTKGAIPENG ESVPILAPVN GYVLAVMEEN ARAVTASTPI MEVGDPSDLE
IEIELLSTDA VAVAPGAHAR IEHWGGEGSL AARITVVEPG GFTKVSAIGV EEQRVTVRAE
LVDAPPPGVL LGDRYGVQAR IVTWQGENVL QVPTGALFRH GGEWRAFVLE GGKAVLRKLA
VGRENGLEAE VREGLAEGET VILHPPDTLK DGMRVEAGKL
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