Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_1042 |
Symbol | |
ID | 8376703 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | + |
Start bp | 1132507 |
End bp | 1133904 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 645000282 |
Product | putative two component, sigma54 specific, transcriptional regulator, Fis family |
Protein accession | YP_003157571 |
Protein GI | 256828843 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000166307 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCAGGA TACTCATTAT CGACGATGAT CCGCAGGTTT GCGAGACGCT GCAGAGCCTG AATTTGCGTC TTGGGCACGA GTGCCTCGCG GCCCATACCT TGAAGGACGG GCTGGCCTAT CTGGGACGCA TGGAGTTCGA CCTTGTCTTT CTCGATGTGC GTCTTCCCGA CGGCAACGGC CTGGAAGCGC TGGGCCAGAT TCGCAACCAC GAAGCTCCGC CCGATGTGAT CGTATTGACG GGCCAGGGCG ATCCCGACGG CGCTGAATTG GCGATCCAGG GCGGGGTTTG GGACTATCTG GTCAAACCCT CGCCCATCAA GCAGATTAAA GAGACCCTGA ATCGCGCCCT GGCGTACCGT CAGGAGAAAA AAGCCATGGG CCAGGCAATG GCTCTGGATT TGAAAGACGT GGTGGGGGAG AGCAGCGTCA TGCGCCAATG CTACGAACGC ATTGCCCAGG CCAGCGGGTC GGACTCCACC GTACTGGTCA CCGGAGAGAC GGGAACCGGC AAGGAGCTGC TGGCCCGCAC CATCCACCGC AACAGTCTGC GCTCGGCGCG GGCTTTTGTT GTCGTCGACT GCGCCTCCCT GACCGAATCC CTGCTTGAGA GCATTCTTTT CGGCCATACC AAAGGCTCGT TCACCGGCGC GGCGCGCGAC AGGACAGGGC TGGTCAAGCT GGCGGATCAG GGTACGCTTT TTCTGGATGA AATCGGGGAG TTGCCGCTTT CGGCGCAAAA AACCTTCTTG CGTGTCCTGC AGGAGCGCCG CTTCAGGCCG GTGGGTTCAA ACCAGGAACT GGAAAGTGAT TTCAGGCTCA TCTCGGCCAC GAACCGTGAC CTTGCGGTCA TGGTCAAGGC CGGTGAATTC AGGCAGGATC TGTTCTATCG CATCAACACC ATCCAGCTGC ATCTGCCCGC CTTGCGCGAA CGCGAGGAGG ACGTGATCAT CCTGGCTCGC CACCATATCG ACAAACTGTG CCGGCAAAGA AACATACCGA TCAAGGAGAT GGATCCGGAG CTGGTCGAGA TGCTCAAGCG ATACGACTGG CCCGGCAATG TACGCGAACT ATTCAATACC ATTGAACAGG CGTTCGTGCT GTCGGGGGCC GAGAAAACGG TCTATGCCCA GCACCTGCCC CAGGCAGTGC GTATTCGGGT CGCCAAGACC AAACTGGGTA AAGGGAGAGC TGATGGGGAA GCGGGGCCGG AGGATGCGTT GGATGAAGTG GAGGAGGCCC TGCCCACATT GAAGGACTTC AAAACGTCCA AGGAAAGGGA ATACCTGCTT CGGCTCGTGG GCAGCCACGG CAAGGATATT CAGAAGATGC TGGCTGTTTC AGGGCTTTCC AGGTCGCACC TTTACGCCAT GCTCAAAAAG CACGATATCG AAGCCTAA
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Protein sequence | MARILIIDDD PQVCETLQSL NLRLGHECLA AHTLKDGLAY LGRMEFDLVF LDVRLPDGNG LEALGQIRNH EAPPDVIVLT GQGDPDGAEL AIQGGVWDYL VKPSPIKQIK ETLNRALAYR QEKKAMGQAM ALDLKDVVGE SSVMRQCYER IAQASGSDST VLVTGETGTG KELLARTIHR NSLRSARAFV VVDCASLTES LLESILFGHT KGSFTGAARD RTGLVKLADQ GTLFLDEIGE LPLSAQKTFL RVLQERRFRP VGSNQELESD FRLISATNRD LAVMVKAGEF RQDLFYRINT IQLHLPALRE REEDVIILAR HHIDKLCRQR NIPIKEMDPE LVEMLKRYDW PGNVRELFNT IEQAFVLSGA EKTVYAQHLP QAVRIRVAKT KLGKGRADGE AGPEDALDEV EEALPTLKDF KTSKEREYLL RLVGSHGKDI QKMLAVSGLS RSHLYAMLKK HDIEA
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