| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_0935 |
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| Symbol | ispG |
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| ID | 8376593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | + |
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| Start bp | 1018260 |
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| End bp | 1019363 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 645000174 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_003157466 |
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| Protein GI | 256828738 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.758646 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCAAA ACGATCCATC CGTACTTTTT CCGCGCGTAA GGACCCGCTC CCTCTCTGTG
GGCGGGGTGG GCATTGGCGG GGACAACCCT GTGCGCGTGC AGTCCATGAC CAACACGGAT
ACTCGTGACG TCGACGCGAC CCTGGCCCAG ATCAAGGCCC TGGCCGGGGC CGGCTGCGAG
ATCGTGCGTC TGGCCGTGCT CGATCTGGAA GCGGCCATGG CTCTCAAAAC CATCTGCGCC
GCCACGCCCG TGCCGCTCAT CGCGGATATC CACTTCGATT CCCGTCTGGC CGTGCAGGCC
GTGGAGGCGG GCGTGAAGGG CCTGCGCATC AATCCCGGCA ACATCGGCGG GCCTGACAAG
GTCGATCGGG TGGTCGACGC AGCCCGCGCG GCCGGCGTGC CCATCCGCAT CGGCGTGAAC
AGCGGCTCCG TGGACAAGGA ACTGCTCAAA AAACACGGCG GCCCGACCCC TGCGGCCATG
GTCGAGAGCG CCTTGGGACA TGTGCGGTTG CTGGAAGAGC GCAAGTTTGG GGACATCAAA
ATTTCGCTCA AATCCTCAAG CGTTTTGGGT ACGATCGCGG CCTACCGGCT CATGGCGAAG
ACCGTCGATT ATCCGTTGCA CATCGGCGTG ACCGAAGCCG GTACGGCCAT GCGCGGGGCG
GTCAAGTCGT CCGTGGGTCT CGGGATTCTG CTGGCCGAGG GCATCGGCGA CACGCTGCGG
GTTTCGCTCA CCGCCGATCC CGTGGAGGAA ATGCTCGTGG CCTGGGAGAT CCTGCGCGCT
TTGGGCCTGC GCTCCAGAGG CCCGGAGATC GTATCCTGCC CGACCTGCGG CCGTACGGAG
ATAGGGCTCA TCGAACTGGC CAGCGCCGTG GAAGACAGGC TGCGCGGGGT GGAGGACGTC
TTCACCGTGG CGGTCATGGG CTGCGTGGTC AACGGGCCGG GCGAGGCGCG GGAGGCGGAC
ATTGGCGTGG CCGGTGGCCG CGAGTCGGGC CTCATCTTCC GCAAGGGCGA GGTTGTGCGC
AAGGTCAAGG GCCGGTCGGA GCTCTTGCCC GCCTTCATGG AAGAGCTGGA AAAATTTCTG
GAGGAGCGGC GGGGCGTCGC ATGA
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| Protein sequence | MTQNDPSVLF PRVRTRSLSV GGVGIGGDNP VRVQSMTNTD TRDVDATLAQ IKALAGAGCE
IVRLAVLDLE AAMALKTICA ATPVPLIADI HFDSRLAVQA VEAGVKGLRI NPGNIGGPDK
VDRVVDAARA AGVPIRIGVN SGSVDKELLK KHGGPTPAAM VESALGHVRL LEERKFGDIK
ISLKSSSVLG TIAAYRLMAK TVDYPLHIGV TEAGTAMRGA VKSSVGLGIL LAEGIGDTLR
VSLTADPVEE MLVAWEILRA LGLRSRGPEI VSCPTCGRTE IGLIELASAV EDRLRGVEDV
FTVAVMGCVV NGPGEAREAD IGVAGGRESG LIFRKGEVVR KVKGRSELLP AFMEELEKFL
EERRGVA
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