Gene Dbac_0805 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_0805 
Symbol 
ID8376460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp880057 
End bp880800 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content60% 
IMG OID645000044 
Productextracellular solute-binding protein family 3 
Protein accessionYP_003157339 
Protein GI256828611 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.789569 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGAAAC GCGCTGCTTT TGTGATCGCC TGCCTCCTGT GCATGGCTGC CGGTCCGGCC 
CTGGCCGAGG AAAAAGTCCT GTTGAACGGC ATCGACGCCA ACTATCCTCC GTTCGCCTAC
GTCGATCAGA GCGGCAAGCC CAGCGGCTTC GACGTGGACG CGGTGGACTG GATCGCGGCC
AAGATGGGCT TCAAGGTCAA GCACGTGCCC GTGGACTGGG ATGGCATCAT TCCCAACCTG
CTGGCCAAGA AGATCGACTT CATCTGCTCC GGCATGACCA TCACCGCCGA GCGTTCCGAA
AAGGTCAACT TCACCGCACC CTACTGGGAA GTGAAGAACG TGTTCGTGAC CAAGAAGGAT
TCCGCGCTCA AGGCGGAGGA AATCTATGGC AAGGAAGTGA CCGTGGGCAT GCAGGCCGGC
ACCTCCGAAG CCAAGTGGAT GGCCGACGAG AAGGAAAAGC AGGGCTGGAA GTTCACCATC
AAGCTGTATG ATTCCGCTCC CATGGCCATC GAAGACCTGG TCAACGGCCG CCTTGATGCC
GCCGCCATGA ACTATCCCCC GGCCCGCGAC GCCGAGAAGA AACGCCCCGT GCAGATCGTC
GGCATTTTCG GCGAGGTCGA GCCTTTTGGC GCTGCCGTGC GCAAGGAAGA CAAGGAACTG
CTCGACACGC TGAACAAGGG CTTCGAACTG CTCAAAGCCG ATCCCTACTG GGAAGAGCTC
ATCGCCAAGC ACCTGAACAA GTAG
 
Protein sequence
MLKRAAFVIA CLLCMAAGPA LAEEKVLLNG IDANYPPFAY VDQSGKPSGF DVDAVDWIAA 
KMGFKVKHVP VDWDGIIPNL LAKKIDFICS GMTITAERSE KVNFTAPYWE VKNVFVTKKD
SALKAEEIYG KEVTVGMQAG TSEAKWMADE KEKQGWKFTI KLYDSAPMAI EDLVNGRLDA
AAMNYPPARD AEKKRPVQIV GIFGEVEPFG AAVRKEDKEL LDTLNKGFEL LKADPYWEEL
IAKHLNK