Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_0805 |
Symbol | |
ID | 8376460 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | + |
Start bp | 880057 |
End bp | 880800 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 645000044 |
Product | extracellular solute-binding protein family 3 |
Protein accession | YP_003157339 |
Protein GI | 256828611 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.789569 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGAAAC GCGCTGCTTT TGTGATCGCC TGCCTCCTGT GCATGGCTGC CGGTCCGGCC CTGGCCGAGG AAAAAGTCCT GTTGAACGGC ATCGACGCCA ACTATCCTCC GTTCGCCTAC GTCGATCAGA GCGGCAAGCC CAGCGGCTTC GACGTGGACG CGGTGGACTG GATCGCGGCC AAGATGGGCT TCAAGGTCAA GCACGTGCCC GTGGACTGGG ATGGCATCAT TCCCAACCTG CTGGCCAAGA AGATCGACTT CATCTGCTCC GGCATGACCA TCACCGCCGA GCGTTCCGAA AAGGTCAACT TCACCGCACC CTACTGGGAA GTGAAGAACG TGTTCGTGAC CAAGAAGGAT TCCGCGCTCA AGGCGGAGGA AATCTATGGC AAGGAAGTGA CCGTGGGCAT GCAGGCCGGC ACCTCCGAAG CCAAGTGGAT GGCCGACGAG AAGGAAAAGC AGGGCTGGAA GTTCACCATC AAGCTGTATG ATTCCGCTCC CATGGCCATC GAAGACCTGG TCAACGGCCG CCTTGATGCC GCCGCCATGA ACTATCCCCC GGCCCGCGAC GCCGAGAAGA AACGCCCCGT GCAGATCGTC GGCATTTTCG GCGAGGTCGA GCCTTTTGGC GCTGCCGTGC GCAAGGAAGA CAAGGAACTG CTCGACACGC TGAACAAGGG CTTCGAACTG CTCAAAGCCG ATCCCTACTG GGAAGAGCTC ATCGCCAAGC ACCTGAACAA GTAG
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Protein sequence | MLKRAAFVIA CLLCMAAGPA LAEEKVLLNG IDANYPPFAY VDQSGKPSGF DVDAVDWIAA KMGFKVKHVP VDWDGIIPNL LAKKIDFICS GMTITAERSE KVNFTAPYWE VKNVFVTKKD SALKAEEIYG KEVTVGMQAG TSEAKWMADE KEKQGWKFTI KLYDSAPMAI EDLVNGRLDA AAMNYPPARD AEKKRPVQIV GIFGEVEPFG AAVRKEDKEL LDTLNKGFEL LKADPYWEEL IAKHLNK
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