| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_0714 |
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| Symbol | |
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| ID | 8376368 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | + |
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| Start bp | 791031 |
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| End bp | 793265 |
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| Gene Length | 2235 bp |
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| Protein Length | 744 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644999957 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_003157253 |
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| Protein GI | 256828525 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTCCCA GGAAATCCCT CTTCAGGCGG CTCTCTCTTT CTCTTGGTCT CTTGAGCACG
GTCATCATCC TTGTCGTTTC GACGCTGGTT TTCTTATTTC TTTCGTGGCG GGTGGGCAAT
CAGATGCAGG AACGGGCCGA GGACACCATC ACGTTTTTGG CTCAGGCCCT GGAGACGCCG
TTCTGGGCCC TGGACCGGGA AAGCGCGGCC GCAGTGGCAA AGGCCACGAG CATGGACGTC
AACGTCGGCC TTCTGGAATT GCGGGACTCC CGGGGCGAAG AATGGTTCGG CTACAACACC
GGCAATTCCC TCTTCATCAT CCGCGAGGCC GAGGTCAGCC ATGAAGGGCA AGTTATCGGC
TCTATCCGCC TGGGCCTGGA GGATTCCGTT CGACAAAAGT CGTTGGCCGG CATTGGTCTT
GTCGGCGGCG GCATAGCGCT GCTTGTCATT CTTGCGCAGT ATTGCCTGGC CAAAAGGCTC
CTGCGCCATT ATTTCCAGCA GCCCTTTGCG GCTTTGGATT CCCTGGTCGG AGCCTATGCG
CGCGGGAATT ACACCCAGGT CGACCCCGGT GTTTACTATA CGGAGTTCGA GCCGCTGGTG
AATGCATTTC TGGGCATGGG GCAAACCATC GAACGGCAGG TCAGCACCCT GGCCGAGAGC
GAAGAGAAAT ACCGGGTGAT TTTCAACAAT TCCCCTGTCG GAATCTTCCG CTCGACCCTG
GATGGTGAGT TGCTGGAAGG CAATGCCGCC TTGGGGAACA TGTTCGGCTA CGCTTCACGG
GACGATTTCT TGGTCTCCAG CGGGCTTCGA GTCGAACCTG TCTATGCGGA TTCTTCGGCT
CGCGAGGCAT ATTTGCGGGA GCTTTTGGCC GCTTCGGGGG CGCTGAGCAG TGAAATGAAG
TTTGTGCGCA AGGACGGCAC GCATTTCGAG GGGGTGCTGA CCGCGTCGAT TCAGCAGGAC
GCGGAAGGCC GTCCGGTTTT TCTGAACGGC GTGGTCGAGG ATGTCAGCGC CCGCAAGAAG
GCCGAGAAGC GTCTGCGGCA GTCGGAAGAG AAGTTTTCGC GTCTGTTCAG GCTTTCGCCC
GACGTCATCG TTGTCATGAA CATGACCGAA GGGCGGATCA TCGACGTCAA CGAGGCCTTC
AGCCGCCTGA CGGGCTTCGC CTACCACGAG GCCGTGGGCA AGACCGCACA GGAGCTTGGC
CTGTACGCAG ATCCTGCCAT GCGCGAGTTG GTGCGGCGGC GTATGCAGAC CAGTGGGCAG
ATCGACAACG TCGATTTTTC TCTTGGCTGC AAGGATGGAA GAACCATCTC CTGCGTGCTG
TCGAGCCAGT TGCTGACAGT GGGTGACGAG TCCTGCGTCA TGGCCGTGTT GCGTGACGTG
ACGGAATTCA AGCGCATGCA GGAGCTCATG ATCCAGAGCG AGAAGATGAT CTCGGTCGGC
GGCATCGCGG CGGGCGTGGC CCACGAGATC AACAACCCGC TCGGCATCAT CATGGTCAGC
AGCCAGAATC TGGTGCAAAG GACCCGGCCG GATTTTTCCA AGAATATCGA GGCGGCCGAA
AATATCGGTC TCGATATGAA TCTATTCGAC CGGTACATGC GGGTCAGGGG CCTGTATGAC
TTCGTCAAAA ATATCCAGGA CGCCGCTGTG CGAGCCGCGG ACATCATCCG TCACATGCTT
GATTTCAGCC GCCGCAGCGA ATCGAGGCGC ACGATTTGCG ATCTGCGCAC CGTCATCGAA
CGGGCCGCGC ATTTGGCGGG GAATGATTTC GAACTCAAAA AAAGCTATGA TTTCAAAAAA
ATAGATATTC AGTGGGAATG TGCTGAAAAT TTTCCCCCCG TCAGTTGCAC GGAAACCGAA
ATCGAGCAGG TGTTTTTGAA CCTGTTTCGA AATGCGGCCC AGGCCATGGC CTCGGCCCAG
CCTCAGATCA TGGCGCCGCG CATCGTGGTG CGCATGAAGG CCGAGGCCGA TCGCGTGGTG
CTGGAGGTGG AGGACAACGG ACCCGGCATG CCGCCCGAAG TGCAGCGCCG GGCCTTTGAA
CCGTTTTTTA CGACCAAGCC GCCGGGAGTG GGGACAGGTC TTGGCCTTTC CGTGTCCTAC
TTCATCATTA CCCGCAGCCA CGATGGGCAG ATGCGGCTGG AATCGCGTCC GGGTCAGGGC
ACGCACTTTA CCATCGAACT CCCGGTCCCT GAGCCCGGTG GGCAAAAGGA GGACGAGTGC
ATTCACGACT CATGA
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| Protein sequence | MAPRKSLFRR LSLSLGLLST VIILVVSTLV FLFLSWRVGN QMQERAEDTI TFLAQALETP
FWALDRESAA AVAKATSMDV NVGLLELRDS RGEEWFGYNT GNSLFIIREA EVSHEGQVIG
SIRLGLEDSV RQKSLAGIGL VGGGIALLVI LAQYCLAKRL LRHYFQQPFA ALDSLVGAYA
RGNYTQVDPG VYYTEFEPLV NAFLGMGQTI ERQVSTLAES EEKYRVIFNN SPVGIFRSTL
DGELLEGNAA LGNMFGYASR DDFLVSSGLR VEPVYADSSA REAYLRELLA ASGALSSEMK
FVRKDGTHFE GVLTASIQQD AEGRPVFLNG VVEDVSARKK AEKRLRQSEE KFSRLFRLSP
DVIVVMNMTE GRIIDVNEAF SRLTGFAYHE AVGKTAQELG LYADPAMREL VRRRMQTSGQ
IDNVDFSLGC KDGRTISCVL SSQLLTVGDE SCVMAVLRDV TEFKRMQELM IQSEKMISVG
GIAAGVAHEI NNPLGIIMVS SQNLVQRTRP DFSKNIEAAE NIGLDMNLFD RYMRVRGLYD
FVKNIQDAAV RAADIIRHML DFSRRSESRR TICDLRTVIE RAAHLAGNDF ELKKSYDFKK
IDIQWECAEN FPPVSCTETE IEQVFLNLFR NAAQAMASAQ PQIMAPRIVV RMKAEADRVV
LEVEDNGPGM PPEVQRRAFE PFFTTKPPGV GTGLGLSVSY FIITRSHDGQ MRLESRPGQG
THFTIELPVP EPGGQKEDEC IHDS
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