Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_0593 |
Symbol | mdoD |
ID | 8376246 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | - |
Start bp | 665618 |
End bp | 667186 |
Gene Length | 1569 bp |
Protein Length | 522 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644999836 |
Product | glucan biosynthesis protein D |
Protein accession | YP_003157133 |
Protein GI | 256828405 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3131] Periplasmic glucans biosynthesis protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000124621 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTCAGAC ATAACGGATT GTTCGGCTTT ATGGCCGGAC TTTTCCTCTT TTTATCCACC GTTCTGTCCC ACGCCCAGAC CCAGGCCCAG ACCCAGGCGC CAGGCTTTGG GCTGCAGGAT GTCGCGACCA TGGCGCAAGC GCTCGCGGCC AAGCCGTATG AAGACAACGC CGGACAGGTG CCCGAGGTCC TTAAGACCAT CTCGTACGAC CAATGGCGGG ACATTCGCTT TGTCCCGGAA AAGAGCCTGT GGCGCGCGGA CAAGCTGCCC TTTGAACTGC AATTCTTCCA TCCGGGGCTG TTCTATGACC GCACCATAGC CGTCAACGTG GTGGAAAAGA ATGTCCCCAC CCGCCTGGCC TTTGATACCG GGGCTTTCGA TTACGGAAAG AACAACTTTG CCGCGCAGAT CCCGACGGAA ATGGGATATG CCGGATTTCG CATCCACACC GCCATCAATA CCAAGAACTA TCTGGATGAG TTTCTGGTCT TTCTTGGGGC CAGCTATTTC AGGGCCGTGG GCAAGGGGCA GAACTACGGC CTGTCCGCCC GTGGACTGGC CATCGACACG GCGGAGCCTT CCGGCGAGGA GTTTCCTTTT TTCAAGGAAT TCTGGATCGT AAAACCCGGC AAGAAGGACA AGTCCATCAC CGTCTACGCG CTGCTGGACT CCCGCCGCGT AGCCGGAGCC TATCGTTTCG AAATCACGAC CGGGGCGGAA ACCGTGCTCG ACGTCGAGTC CATTCTCTTT TTACGCGAAC CGGTGGCCAA GCTGGGGATC GCGCCCCTGA CCAGCATGTT CATCTTCGGG GAGAACTCCA ATCCTCGCGT GAGCGACGAC TTCAGACCCG AAGTCCATGA CTCCGACGGC CTCATGGCTG CGTTCGACAA CAACGAATGG ATATGGCGGC CGCTGCAAAA CCCCAAATCC CTGTCCGTCA ATGTCTTCAG CGCACCCAAC ATTCGTGGCA TGGGCCTCAT GCAGCGCGAC ACGGATTATG CGAACTACCT CGACCTTGAG GCCAAATACG AGGCCAGACC CAGCGCCTGG ATCGAACCCA AGGGCGACTG GGGACCAGGC AAACTTCATC TGGTGCAGAT TCCCTCACCG GAGGAGATTC ACGACAACAT CGTCACCTTC TGGACTCCCG ACTCAACTCC GCAGCCGGGG CAACCCATCG CCTTTGACTA CAGGCTTCGC TGGGCGCCGC CCAAACGCGT GACCTCTCCC GAGGGGCAGG TCATCTTCAC GCGCACCGGA AAAGGAAAAA CGGCCAACTC CAGACTGTTC GTGCTTGAGT TCAAGGGCGG CAAGCTTGAG GATCTGCCGG ACGACGCGGC CCTGGACGCC AACGTCTGGG TCGGAATGGG CGGCAAGCTT CTGGAAAAAC GCGTCTATAA AAATCCTGTC ACCGACAGCT GGCGTCTGGT ATTTGAAATC GAACCCGATT CGGCTTCCGC CCTTTCCATG GTCCTGCCGG ACAAAAGGCC AAGCATCGAA ATGCGGGCAA TCCTGCAACA CGGCGTAACC CCGCTGACCG AAACATGGAC CTACGCCATC AAACTCTGA
|
Protein sequence | MFRHNGLFGF MAGLFLFLST VLSHAQTQAQ TQAPGFGLQD VATMAQALAA KPYEDNAGQV PEVLKTISYD QWRDIRFVPE KSLWRADKLP FELQFFHPGL FYDRTIAVNV VEKNVPTRLA FDTGAFDYGK NNFAAQIPTE MGYAGFRIHT AINTKNYLDE FLVFLGASYF RAVGKGQNYG LSARGLAIDT AEPSGEEFPF FKEFWIVKPG KKDKSITVYA LLDSRRVAGA YRFEITTGAE TVLDVESILF LREPVAKLGI APLTSMFIFG ENSNPRVSDD FRPEVHDSDG LMAAFDNNEW IWRPLQNPKS LSVNVFSAPN IRGMGLMQRD TDYANYLDLE AKYEARPSAW IEPKGDWGPG KLHLVQIPSP EEIHDNIVTF WTPDSTPQPG QPIAFDYRLR WAPPKRVTSP EGQVIFTRTG KGKTANSRLF VLEFKGGKLE DLPDDAALDA NVWVGMGGKL LEKRVYKNPV TDSWRLVFEI EPDSASALSM VLPDKRPSIE MRAILQHGVT PLTETWTYAI KL
|
| |