| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_0588 |
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| Symbol | |
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| ID | 8376241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | + |
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| Start bp | 660713 |
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| End bp | 662032 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644999831 |
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| Product | WD40 domain protein beta Propeller |
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| Protein accession | YP_003157128 |
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| Protein GI | 256828400 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000301748 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATAAAAA AAATCCTTCT CATTCTGCTG GCGCTGCTGG CGTTCTCCGC GTCTGCCCTG
GCCGCCGGAG TGCTGAACAT CGACATTTAT GGACCGGGAC AGTCCCGGGT CAATCTTTTC
GTGGCCGAGG CGCTGTCCAA GGACGGTTCG GGCCCGGTGG GAGCCATCCC CGGCAACGCG
CCGTCGGAAT TGCAGCAGCG CATTCATGCC AACTGCGCCT TTTTGCCATT TTTCAACATG
CTCTCCGGAA AGGATATCGT CGGTGGCCCC AATCCCGGCG GCTATGTGGC GCAGAGCATC
GACTTCAACA AGTTTCAGCT CGCGCGCACC GACGTGCTGG TCACGGCTGC CTGGGCGCCC
CGCCCTGGCG GAGTCGGCGA GGTGGAGCTG CGCGCCTATG AGGTCTACAC GGGCCGCCTG
ATTGTGGGCA AAGGCTATGG CGTAGCGAAC AATCAACAGA TTCCCGAGGT GGCGGCGCGG
TTTTGCGCGG ACCTGATGGA GGCTTTGACC GGGCAGGGGG ATTTCTTCCG TTCGAACATC
GCCTTCGTCA AGAAGGAAGG GCAGCGCAAG CAGGTTTACA TGGCCACGGC CCAGGGCCTC
AATCTGCAGA AGATCACCAA CCTGGACGGG ATCGCGGTCA GTCCTGCCTG GTCCCACGAC
GGTCAAAAGC TGGTTTTTGT CTTTCTGGAC AAGAAGTATC ACAATCTGTG CGTCTGGGAT
CGACAGACCA GAACCCTGGA TAAAAAGAGG CTCCCCGGAA ATACCCTTAT CGCGCCTGCC
TTCACCAAGA CCGGCAATGT GGCGATCAGT CTCGACATGC GCGGAAATCC GGACATTTAC
GAGCTGAATT CCGAATACAA GGTCGTGCGT CCTCTCGAGG AGAACTGGGG TATTGACATC
GGGCCGGATT TTGATCGGTC TGGCGAGAAA ATGGTGTTTG TTTCCAATAG GTTAGGAAAT
CCGCATGTAT TTTTGAAAAA TATGGTCACA GGACAGAGCA AACGCATCTC CCTGACTGGA
AAATACAATA CCGGTCCAAG CATCAGTCCC GACGGTTCTC AGGTTGTTTT TGCCCAGATG
GTGAACGGAA ATCATAAATT ATTTCTGGTG GATTTGGCTT CCGGGCACGA GCGCCAGTTG
ACATTTGGCC CCGGTAGTGA TGAAGATCCC ACTTGGTCTC CTGATGGTTA TTTCATAGCT
TTTGCGTCAA ACAGATCCGG CCCGAGCAAG ATCTACCTGA CGACCAAACA TGGAGACGAA
CCTATTTTGA TTCCAACCGG ACCAGGGGAA GCTACTTCTC CGGCCTGGGG GAAATTATAG
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| Protein sequence | MIKKILLILL ALLAFSASAL AAGVLNIDIY GPGQSRVNLF VAEALSKDGS GPVGAIPGNA
PSELQQRIHA NCAFLPFFNM LSGKDIVGGP NPGGYVAQSI DFNKFQLART DVLVTAAWAP
RPGGVGEVEL RAYEVYTGRL IVGKGYGVAN NQQIPEVAAR FCADLMEALT GQGDFFRSNI
AFVKKEGQRK QVYMATAQGL NLQKITNLDG IAVSPAWSHD GQKLVFVFLD KKYHNLCVWD
RQTRTLDKKR LPGNTLIAPA FTKTGNVAIS LDMRGNPDIY ELNSEYKVVR PLEENWGIDI
GPDFDRSGEK MVFVSNRLGN PHVFLKNMVT GQSKRISLTG KYNTGPSISP DGSQVVFAQM
VNGNHKLFLV DLASGHERQL TFGPGSDEDP TWSPDGYFIA FASNRSGPSK IYLTTKHGDE
PILIPTGPGE ATSPAWGKL
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