| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_0568 |
|---|
| Symbol | |
|---|
| ID | 8376221 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | + |
|---|
| Start bp | 643132 |
|---|
| End bp | 644676 |
|---|
| Gene Length | 1545 bp |
|---|
| Protein Length | 514 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644999811 |
|---|
| Product | cytochrome c class III |
|---|
| Protein accession | YP_003157108 |
|---|
| Protein GI | 256828380 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGAAGG GAAGACCAAT GCTGCGATGG GTTGGAATCC TGTGCGTAAG CATGGCTGTG
GCTGGATTCG GTCTGAACGC TCTTGGGGGA AAACAGGAAT CGGTCGAAAC GAAAGCAATG
GGCGCGGATC TCATATCCAT CGAAACGCTC AAGAAGTTCG GTGATCTCGA TTATCCTGTG
GTCCGGTTCG AGCATGACAA GCACACCAAG GCTGTGGAGG GGAAGTGCGA ATCCTGCCAT
ACTGTGACCG GCAACACGGT CACGGCCAAG TTCAAGCGTC AGGAAGATAC GAATGCCGCG
GAAATCAAGG CCATTTATCA CGACAACTGC ATCACGTGCC ATGACGACAC GTCCAAGGCC
GGCAAGAAAA GCGGACCCGG CAGCGAGCAG TGCCGGACCT GTCACGCGGG GCCTGCGGAT
TCGTCACGGA CGTTGATCTC GTTCGATAAA TCCCTGCATT ACCGCCACTC GTCTTCGAAG
ATGGTTCTTC CTGCCCCTGG GCAGAAGGAG AACTGCTCCA AATGCCACTC CCAGGACAAG
CCCGAAGAGC GCAATCTCGC CTTTGCCGAG AACAAGGATC AGGCGCATGA AAAATGTCTG
TCCTGTCATA TGGAGATCGG TAAGGCGCAG CAGCCTACCG GTCCTGTAGA GTGCGCCGGC
TGTCATGACG CCACTGTCCG CGCCGGATTC AAGAAGGTCG CGGATGCGCC ACGGCTTGAA
GCCGGTCAGT CCGATTACGC GCTGCTCATG GCCGCCACGG CTCAGGCCGG AACCGAGCCC
AAGCTGGTCA GCGCCGTGCC TTTCAATCAC AAGCTGCATG AAGAAAAGAA CGAGAACTGC
TCGGTCTGCC ATCATAACGC TTCGTCCAAG GGCGTGATCC CCTGTTCGCA GTGCCACACG
TCATTGGGCA AGGAAGAGGG CGGCTTCATA ACCACCGAGC AGGCCATGCA CCGCGTGACC
GCTCAGGCCA GTTGCGTGGG GTGTCATGCC CAGGCGCAGG CCAAGCCGGA ATGCGCCGGA
TGCCACACCT TCATGGGTCG AACCGGTCAG AACACAGATG CCAGTTGCGT CAAATGCCAT
GTCGACATCA CGCCCGGAGC TGAGCTGATC AATGACAAGA ACGCCCGCAG CAACACTGCG
GCGATGCTCA TGAACACCCG CATCAAGAGC GACCCTGAGA TCAAGGTCGG CGAGATTCCC
GAGATCGTCG AGATCAGCGT CCTGGCCAAC GAGTACCAGG CCAGCAAATT CCCACATCGC
AAGATCGTGC AGAAGATCAT GGAAGGCATG AAGGACGACA GCATGGCTGC GTACTTTCAC
TCCAGCCCGA ACGCTGTCTG TTCCGGTTGT CATCACAACA GTCCAGCTTC AGCCAATCCT
CCCAAATGCG TCAGTTGTCA TGGCAAGGTC GCGAGCGCGC AGGATGGAGC CAAGCCAGAC
CTCAAGACCG CCTATCACCA GCAATGCATC GGTTGTCATA GCGAAATGGG CATCCAGAAG
CCGGCGGCCA CTGCCTGCGC GGAATGTCAT GCCGTAAAGC AATAA
|
|---|
| Protein sequence | MEKGRPMLRW VGILCVSMAV AGFGLNALGG KQESVETKAM GADLISIETL KKFGDLDYPV
VRFEHDKHTK AVEGKCESCH TVTGNTVTAK FKRQEDTNAA EIKAIYHDNC ITCHDDTSKA
GKKSGPGSEQ CRTCHAGPAD SSRTLISFDK SLHYRHSSSK MVLPAPGQKE NCSKCHSQDK
PEERNLAFAE NKDQAHEKCL SCHMEIGKAQ QPTGPVECAG CHDATVRAGF KKVADAPRLE
AGQSDYALLM AATAQAGTEP KLVSAVPFNH KLHEEKNENC SVCHHNASSK GVIPCSQCHT
SLGKEEGGFI TTEQAMHRVT AQASCVGCHA QAQAKPECAG CHTFMGRTGQ NTDASCVKCH
VDITPGAELI NDKNARSNTA AMLMNTRIKS DPEIKVGEIP EIVEISVLAN EYQASKFPHR
KIVQKIMEGM KDDSMAAYFH SSPNAVCSGC HHNSPASANP PKCVSCHGKV ASAQDGAKPD
LKTAYHQQCI GCHSEMGIQK PAATACAECH AVKQ
|
|---|
| |