Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_0512 |
Symbol | |
ID | 8376164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | + |
Start bp | 591550 |
End bp | 594108 |
Gene Length | 2559 bp |
Protein Length | 852 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644999754 |
Product | Radical SAM domain protein |
Protein accession | YP_003157052 |
Protein GI | 256828324 |
COG category | [C] Energy production and conversion |
COG ID | [COG1032] Fe-S oxidoreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00242025 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGGCTC TGCTCCCCCT TTTTTCCCGC CCCAGCCACT ACCTCGGCAC CGAGATCAAC AGCGTCCACA AGGACCTGAA AACGGTCCGG GCCCACGTGG CCCTGGCCTT TCCGGATCTC TACGAAGTGG CCATGTCCTA TCTCGGACAG AAAATTCTGT ACGACATCGT CAACGCCACC GATCATTTCT GCGCCGAGCG GGTCTTCGCG CCTACCGAGG ACGTGGCCGA GGTGCTGCGC ACTCATGACA CGCTCCTGGC CACTCTTGAA AGCGACACGC CGCTCAAGGA TCTGGACGGG GTGCTGTTCA GCATCACCCA TGAGCTGTGT TACACCAACG TGCTCTACAT GCTCGATCTG GGGGGGATTC CCCTGCGTGC GGCGCAGCGC GTGAACGGGC ACCCGCTGGT CATCGCGGGA GGAGGCTGCA CCTTCAACGC AGAGCCGCTG GCTCCTTTTA TGGACGTCAT GGTGCTCGGC GACGGGGAGG AAGTCCTGCC CGAGATGCTT GAGCTCATTG CCCTCGGCAA GGACGAAGGC TGGTCCCGCA GCGAACTGAT CAGCCGTCTG GCCGGGATTC CCGGCGTGTA CGTGCCTTCA TTTTTCGAGG ACGACGGCAG CGGGGCCATG CGTCCTCTGG ACGGCGCGCG GCCCCAGGTC GAAAAGCGCA TCGTCATGGA CATGAACAAG GTCTCCTTCC CCACGCGTCA GATCGTGCCC TTCGGCAAGC CCGTGCACGA CCGCTATTCG GTGGAGATCG CGCGTGGCTG CACCCGCGGC TGCCGCTTCT GCCAGGCGGG CATGATCTAC CGCCCCGTGC GTGAGCGCGA GGTCGACGTG CTGGGTTCCA TCATCGATCG CGGCCTGGCC GAGACGGGCA GCGAGGAGCT TTCATTCCTG TCGCTCAGCA CCGGGGATTT CAGCGCCCTG GAGGCCCTTT TTCTGTCCTC CTACAGCCAC TGCAGGCAGG AGCAGGTTTC CATTTCCCTG CCGTCCCTGC GCGTAGGCTC GGTCTCCGAA GACCTCATGC GGCTCATGGG CAAAATCCGG CACACGGGCA TGACCCTGGC CCCCGAGGCC GGCACCCAGC GGCTGCGCAA CGTCATCAAC AAGGGCGTGA CCGAGGACGA ACTGCTCGAC CACACCGGCA AGGCCTTTCG CCTGGGCTGG CAGCAGGTCA AACTGTATTT CATGATGGGT CTGCCTACCG AGACCCGCGA GGATCTGCAC GGCATCCTGG ACCTGTGCCT GAAGGTCGCG GCCAGTGCCC CAAAGAATGT CAGGCGTCTG CAGGTCACGG CGGCGGTTTC GCCGTTTGTG CCCAAGCCGC ACACCCCGTT TCAGTGGGAG CGGCAGATCT CCATGGCCGA GATCGAGGAG CGGCTGGCCT ATCTGCGCAA TATCTTCCGC CCTTACAAGA AGCTCAAGCT CAAGTGGCAC CATTCGCACA TGACCTGGCT GGAAGGGGTA TTCGCCCGTG GCGACCGGCA TCTGGCTCCC GCCCTCGAGT CCGCGTACGC CAAGGGCGCG CTCTTCACCA GCTGGTCCGA CCATCTGCGC CTTGAACCGT GGCTGGAGGC CTTTGCCGAG ACCGGCATCG ACGCCGAATC CTATCTGCGC GAACGGGACC CGGAGCAGCC CCTGCCGTGG GATCATCTCA CCTCGGGGGT GAGCCGCAAA TTTCTGCTGA CCGAACGCCG CCGCGCCCTG GAAGCGGCCG GAACGCCGGA TTGCCGCTAC GAGGCGTGCC GGTCCTGCGG AGTCTGCACC CTGGACGGCC GCGAGTCCGA ACTGGTGCAG CAGGCCGCAG GTCACGACAT CGTGCCGGTC ATCAACCGCG CCACGCGCGA CCAGGCAGAC GCCGAGCAGG TGGAGGAACC GGAGGAGCAG CCAGCGGGAC AGCCCGCGGC TTCAACCGAC GATCTGCACA ACAAGGCGCA ACGCTTTCGT CTGTGGTATT CCAAGACCGG ACCGGCCATG TACCTGAGCC AGCTCGAATT GCAGCGGATC TTCGAGCGCG CTTTTCGCCG CGCGCGGTTG CCGCTGGCTT TCAGCAGCGG CTTCCATCCC GCGCCGCTCC TGTCCTTTGC CCGGGCCCTG CCCGTGGGCG TCGGCAGCGT CTGCGAGTGG ATGGACTTCT TTGTGCGCGA GCACATGGGC GTCCGGGACC TGCCGGCCTT GCTGGAGGCC GAGTTGCCCC AGGGCATGCG CGTGGTCAAG GTGGACGAGC TGCCGTGTCA GGGCCGGGCT CCCATCTCGA ACCACGAGCG TTTTTCCCTC GGGTTTACGT GTGCCGAAGA CAGCCTGCGC TTTTCAGGCC GAATCCCAGC TTTTCTGGAG GCCGCGGAGT GGAAGGTCTT CAAGCGGACC AAGAAAGGCG AGCCGGGCGA AGTGGACGTG CGGCCCATGG TTACGTCCAT CACCGAGGAC GAGAAGGGCT TTATCATCGA TTTTGACTGG CAGACCCTCT ATGTCAGCCC GATCTTTGTG CTGCAGGCCG TGGACCCGGA TTTTACAATG CTGCAGGGAC GGCTGATCAA GACGGCGCAG TTTTTTTGA
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Protein sequence | MKALLPLFSR PSHYLGTEIN SVHKDLKTVR AHVALAFPDL YEVAMSYLGQ KILYDIVNAT DHFCAERVFA PTEDVAEVLR THDTLLATLE SDTPLKDLDG VLFSITHELC YTNVLYMLDL GGIPLRAAQR VNGHPLVIAG GGCTFNAEPL APFMDVMVLG DGEEVLPEML ELIALGKDEG WSRSELISRL AGIPGVYVPS FFEDDGSGAM RPLDGARPQV EKRIVMDMNK VSFPTRQIVP FGKPVHDRYS VEIARGCTRG CRFCQAGMIY RPVREREVDV LGSIIDRGLA ETGSEELSFL SLSTGDFSAL EALFLSSYSH CRQEQVSISL PSLRVGSVSE DLMRLMGKIR HTGMTLAPEA GTQRLRNVIN KGVTEDELLD HTGKAFRLGW QQVKLYFMMG LPTETREDLH GILDLCLKVA ASAPKNVRRL QVTAAVSPFV PKPHTPFQWE RQISMAEIEE RLAYLRNIFR PYKKLKLKWH HSHMTWLEGV FARGDRHLAP ALESAYAKGA LFTSWSDHLR LEPWLEAFAE TGIDAESYLR ERDPEQPLPW DHLTSGVSRK FLLTERRRAL EAAGTPDCRY EACRSCGVCT LDGRESELVQ QAAGHDIVPV INRATRDQAD AEQVEEPEEQ PAGQPAASTD DLHNKAQRFR LWYSKTGPAM YLSQLELQRI FERAFRRARL PLAFSSGFHP APLLSFARAL PVGVGSVCEW MDFFVREHMG VRDLPALLEA ELPQGMRVVK VDELPCQGRA PISNHERFSL GFTCAEDSLR FSGRIPAFLE AAEWKVFKRT KKGEPGEVDV RPMVTSITED EKGFIIDFDW QTLYVSPIFV LQAVDPDFTM LQGRLIKTAQ FF
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