| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_0501 |
|---|
| Symbol | |
|---|
| ID | 8376152 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | - |
|---|
| Start bp | 578774 |
|---|
| End bp | 581641 |
|---|
| Gene Length | 2868 bp |
|---|
| Protein Length | 955 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644999743 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_003157042 |
|---|
| Protein GI | 256828314 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAATACTC TGAGTTCGGC TTACTTCGTT ATTCCCGGCG GAATCAGCTT AAGGCGACAC
TGTTTCTCCA TAACGGTTGC CGTATTGGCC TTCCTGGTAT TGCTTCCTTC GTGTTTCATC
GGCCTGAGTC CGGTTTGGGC AGCCGAGGTG TGCGTCCTGG ACGCGAAAAA GGAATACCAC
GATCTGCGCC CCTTCATGGA GTTTATGGAG GACGCGGACC GTTCGTTGAG CATTGATCAG
GCGGCGGCGC CTGCCTTGGC TGACCGCTTC GGCCTGCCTC CCAAAGGGCA TTTCAATTTT
GGCCTGACCT CTTCCGCCTT GTGGTTCCGG TTCACCATCG TCGATCATCC ATCGAATTCC
GCGGAGGGCA GGTTGCCGTC TCTGTGGATT TTTGATCCAG GCTGGCAGTT CTACGACACC
ATCGATCTCT ATGTGCCGGA ACCGGATGCG ACGGGCGGGT GGCGGACCTA CTCCGCCGGT
CGTCTGCCTT CCGTTCCGGG AGCCCCGGAC AAGCGGTTCT TCAAGCTTCC TGTGGGACTT
GGCGAGCCCA CCACCTGCTA CCTTCGGGTC ACCGGAATCC GGCCGATCAT GGTGGCCCCT
CATCTCGCTT CCCTCGACAG CACCCTGCGC GTCAACGGCT TCAAGACGCT GGGCGTCGCC
CTTCTGATCG GGTTTTTCGC CACGCTCATG CTCGGCAACC TGGCCATCTA CCTTTATACC
GGCAACAGCA AATACAAGTG GTTCGTACTC AGCAACCTGA CCTTCGCCAG TTTCGTCGCC
ACCACCAACT ACCAGCATCT CTTTGTAGTC AAAAACCTCC CGACGGTCAT CATGACGGTC
GGTCTGGTGG GGCAGGCCAT AGTCGCCACG ACAGTCAGGC AGTTTTTTGA AATCAGCAAG
CACAACAAAA AGATCAACGC TATCCTACTG ATCTGCGTCT GGGCAGTTCT GGGCGTCTCC
GCCTCCGCAT TTGCCCTGCC TGAGGAGATC CACCCGAAGC TGTCCATATA CGCGGTCATG
CCCCTCACGC TTGTCGTGTT CCTGGCCTGT TTCGACTGCC TCAAGCGCGA CAGGGTGCCT
GCTCTGATCT TCATGGGCGC CTGGCTCGGG GCGACTCTTG CCGCTTTCAC CTACAACTGG
GCCATCAAAG GCGGCCTTTC CTTCGTCCAT CCCTCCTTCA TGTGGGTGTC CTTCGTGGTC
GAGGCCATGT GCATGTCCAT CCTGCTGGCC TACAACATCG AGACCTTGTC GGCGCAGCGT
CAGGCCGCCG AGGCCATGGC CCAGACCCGG TCGTCATTTT TGGCCAGCAT GAGCCACGAG
ATCCGCACTC CCATGACCGC CGTTCTGGGT TTTTTGAACC TGTCCCTGCA CTTGAGGGCA
CAGGGACAAC TGCGGCAATA CCTTCTGAAG ATCAACGCCG CGGCCAATCA CCTGATGGGA
ATCATCAACG ACATCCTGGA TTTGGCGAAA ATAGAGGCCG GCAAAGTGGA ACTGGAGGCG
AAACCTTTCG AAGTGGAGAC ACTGCTGCAG GATACCGCCG ACCTCCTGGT TTCGGGGGCC
TTCGAAAACG GTAACGAACT GGTGGTCTCG GTGCAGCCGG GGCTTCCCCG CCGCGTGACG
GGCGATTCTC TGCGGCTCAA GCAGGTCCTG CTCAACCTGA GCAGCAACGC CGTCAAGTTC
ACCCATGGCG GCACGGTTCG ACTGGCCGTG CACGCTGCTG CGGATGCGAC GCCGGTTCAC
GACGCGGTCA CCTTGCGCTT TGAAGTGAGC GACACGGGCA TCGGCATTGA CCCTGCGGTG
CTGCCGCGCC TGTTCACCTC CTTCGAGCAG GCCGACGCGG CCACGGCCCG CGTGTACGGC
GGCACCGGCC TTGGCCTGAG CATCAGCCGC AGGCTGGTGC AGATCATGGG CGGGGACATC
ACGGTACGGA GTCGGCCGGG AGAGGGGTCG ATCTTCGAAT TCACGGTCGT GTTCGGTCCG
GATCCGCAAG ACGAGGTCCG AGGCGAAGCA AACGCCGCAG GCCATGGTTC CCTGAACGTG
CTGGTGGTCG AGGACAATCC GGCCAGTCGG GCGGCCATGG AAGAAGTCGC GACCTGCCTC
GGCCTGCGGC ACAGGTTCGC AGGGACGGCG GCGGAGGCGT CGCAACTGGG AGATGCGGAA
AATTTCGACC TGATCCTAGT CGACTGGAAC CTGCCGGACA TGATTGGGCC CGAGGCGGTC
ACGCTTCTGC GCTCTTCCGA GCGCACGGCC CGGGTGCCGG TGGCGCTCAT GGCCAGCCCG
GCGCGGCCCG AAATGGAAAA TCTGCGTCTG CAGGGATCTG GCGTCCAAGG TATTTTGGCC
AAGCCGTTCA CAGCCTCGGC GGTGGAGGTT CTGCTCCGGC AGATCGCCTC CAGTGACAAA
TCCGCAGCCT TGGCAGACGC GCACACCCTG GCCGACGCGC CGTACGATCT GGAGCAGGCG
CAGGGCTTGC GCGTCCTCTT GGCGGAAGAC AACCTGTTCA ATCAGGAACT GCTGGGCGTG
ATTCTGACCG AAGCCGGGGT GGAGATGGAG ATCGCGGACA ACGGCGCCGA AGCCGTACGC
CGGGTGACGG AAGGAGGAGC ACCCCTGGAT GTGGTGCTCA TGGACGTGCA CATGCCGTTG
ATGGACGGAT TCGAGGCCAC GCGGACCATC CGGAACGACC AGCGCTTCAG CGGCCTGCCC
ATCATCGCCA TGACCGCCGA CATCACGGCC GAGGACAAGG CGCGCTGCCT TGAAGCGGGC
ATGGATGACC ACCTGACCAA GCCGGTGGAC ACCGATGAAC TTTTCAGGAT CCTGGTTAAA
TGGGGGCGCA AGGCCCAGGG GGAGCAGAAT GGGCAACGCC ATGAGTAA
|
|---|
| Protein sequence | MNTLSSAYFV IPGGISLRRH CFSITVAVLA FLVLLPSCFI GLSPVWAAEV CVLDAKKEYH
DLRPFMEFME DADRSLSIDQ AAAPALADRF GLPPKGHFNF GLTSSALWFR FTIVDHPSNS
AEGRLPSLWI FDPGWQFYDT IDLYVPEPDA TGGWRTYSAG RLPSVPGAPD KRFFKLPVGL
GEPTTCYLRV TGIRPIMVAP HLASLDSTLR VNGFKTLGVA LLIGFFATLM LGNLAIYLYT
GNSKYKWFVL SNLTFASFVA TTNYQHLFVV KNLPTVIMTV GLVGQAIVAT TVRQFFEISK
HNKKINAILL ICVWAVLGVS ASAFALPEEI HPKLSIYAVM PLTLVVFLAC FDCLKRDRVP
ALIFMGAWLG ATLAAFTYNW AIKGGLSFVH PSFMWVSFVV EAMCMSILLA YNIETLSAQR
QAAEAMAQTR SSFLASMSHE IRTPMTAVLG FLNLSLHLRA QGQLRQYLLK INAAANHLMG
IINDILDLAK IEAGKVELEA KPFEVETLLQ DTADLLVSGA FENGNELVVS VQPGLPRRVT
GDSLRLKQVL LNLSSNAVKF THGGTVRLAV HAAADATPVH DAVTLRFEVS DTGIGIDPAV
LPRLFTSFEQ ADAATARVYG GTGLGLSISR RLVQIMGGDI TVRSRPGEGS IFEFTVVFGP
DPQDEVRGEA NAAGHGSLNV LVVEDNPASR AAMEEVATCL GLRHRFAGTA AEASQLGDAE
NFDLILVDWN LPDMIGPEAV TLLRSSERTA RVPVALMASP ARPEMENLRL QGSGVQGILA
KPFTASAVEV LLRQIASSDK SAALADAHTL ADAPYDLEQA QGLRVLLAED NLFNQELLGV
ILTEAGVEME IADNGAEAVR RVTEGGAPLD VVLMDVHMPL MDGFEATRTI RNDQRFSGLP
IIAMTADITA EDKARCLEAG MDDHLTKPVD TDELFRILVK WGRKAQGEQN GQRHE
|
|---|
| |