Gene Dbac_0427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_0427 
Symbol 
ID8376076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp503504 
End bp504226 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content57% 
IMG OID644999668 
ProductNLP/P60 protein 
Protein accessionYP_003156969 
Protein GI256828241 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTTC CGCAAGGTGG GCAAGGCCCC CGTAATGAGT TTTTGGCTTT GCCCGGATTT 
GCGCTCCTTC TCTTTATTTT TTGCACCCTG GGTGGCTGTT CGCCCAAGCA CGTGGACTCA
TCCTTCTGTC CCCCGGCTGT CATGCAGGAA CCCGTTGCCC AATCGGAAGC GCGCCAGGAT
GACGACACGG GGCCTGTCCG GCATCGCGAA TTCGATTATT CAACCATCTT TTCCCGTGAT
AACGATTATT TCTCCACCTC GGCCCCGGAA TACGCCGCCG ATTTTTCTTC CCTGACAACG
TCCGATGAAA TCGAGCCGGT TCCCGCCATC GGGGACATTG TTCTTGCGCA GTACGAAGAT
TGGCGTGGAG TGCGCTATCG TTTAGGCGGC ACGGACTATC GCGGCGTGGA TTGCTCGGGG
CTGGTGCAGG CGATTTATAA GGACGCCTTC GAAATGGAAT TGCCCCGCAC ATCCTCGGAA
CAGGCCAAAT TGGGCGAGGC CGTGCCTCGT GACGAAATCC AGCCGGGCGA TCTGTTGTAC
TTCATTGATC GCGGCCGCAA GCATATGGGC GTGGCCGTGA ACGAGAACGA ATTTTTGCAC
GCTTCGCGCA AGAAAGGCGT GACTCTGTCC AAGTTCGACA AATACTGGAC CCCGCGTTTG
AAGCGCGTCC GTCGCATTCT GGATAGCGAT GAGCAGCTTG TGATCCGCCC CAGCGGCGGC
TGA
 
Protein sequence
MDFPQGGQGP RNEFLALPGF ALLLFIFCTL GGCSPKHVDS SFCPPAVMQE PVAQSEARQD 
DDTGPVRHRE FDYSTIFSRD NDYFSTSAPE YAADFSSLTT SDEIEPVPAI GDIVLAQYED
WRGVRYRLGG TDYRGVDCSG LVQAIYKDAF EMELPRTSSE QAKLGEAVPR DEIQPGDLLY
FIDRGRKHMG VAVNENEFLH ASRKKGVTLS KFDKYWTPRL KRVRRILDSD EQLVIRPSGG