Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_0371 |
Symbol | |
ID | 8376019 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | - |
Start bp | 438696 |
End bp | 440462 |
Gene Length | 1767 bp |
Protein Length | 588 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644999612 |
Product | exodeoxyribonuclease V, alpha subunit |
Protein accession | YP_003156914 |
Protein GI | 256828186 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
TIGRFAM ID | [TIGR01447] exodeoxyribonuclease V, alpha subunit [TIGR01448] helicase, putative, RecD/TraA family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.219276 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCGCCA GCCCCGCCAT CCTGCCCCGA CTTGCGGCCA GCACCCTCTT TTCCGAGGCC GACCTTTACC AGGCCCGCTT TGCCGCCTCC CTGGCCCGGG AAGGACACGC CAACCTCGTG GCCGGTTTGA CCGCCCTCGT TTCCCTGGCC GTGCGCGAGG GGCACGTCTG CCTGCACCTC GGCGACGAGG GCGTCCGCGA ACGGCTGGCC GCCCTGGGCC TGGACGGGAC GCACGCCTGC CAGTTGACGG GTGTTGTCGG TGCGCCGGGT TCCGGGCTGC CGCTCATTCT GGACGGCGAG CGCCTGTATT TCTCCCGCTT CTTCCGCGAC GAAGAGGCCC TGGCCCGCGC CTTCATGCGT CTGGCTGGCG CGCCGCCCCG GGACATCCCG GCAGACCTGC TGCCCGACAT CTTCAAGACC AAGGGCGACG AAACCGACTG GCAGGACGTG GCCTGCTTTG CGGCCCTGCG CAGCCGCCTC TGCGTCATCT CCGGCGGCCC CGGCACGGGC AAAACCACAA CCGTAGCCCG CATCCTGGCC TTGGCGTCCC GCATGCACAC TGGCGCGAAT TTTCGCATCC GCCTGGCCGC GCCCACGGGC AAGGCGGCCT CGCGCATGAC CGAAGCTCTG GCCGAAGCCT TTCCCGAGGG CAGCCAGCTG CCTGAACTGA ATGCGTGCCT CGCACAAGGC GCCCAGACAG TGCACCGCTT GCTGGGCTGG AGTTCCGGAG GCTTCCGCCA CTGCCAAGGC AACCCCTTGC CGCTCGATAT GCTTGTCGTG GACGAAGCCT CCATGCTGGA CTTGGAACTG GCCGCGCGGC TCATGGATGC CTTGCCAGAC GAGGCGAGTC TGGTGCTCCT AGGGGACCGC AACCAATTGG CCTCGGTGGA GGCCGGAGCC GTCCTGGCCA ATCTCTGCCG GGAGGACATC GTAAACGCCT TCTCGCCGGA TTTTACAGCT TACGCCGCCA AAGCCGGCGC TCAGGGACTG ACTGCGACTG GGATTCCAGT CCCGTTGACC GACCATGTAG TGGAACTGAA GAAAAGCTGG CGCTTCGGCC AGCACAGCGG CATCGCAGCC TTGAGCACGC TCATTCGCGA CGGTCAGGCC CAGATGGCCG GCGAACTGCT GGTTGAAGGA CGGACTGATC TGGAGATGTT GCCCTGCACT GGGCAAGCGA ACCTGACGGC CACGCTGACG CCGCTTCTGC GTGAAGCATT CAGGGGCCTC GGAGGGACAA CCGACCCCAC GCGGGCGTTC GAGATTTTCG GGACCCTGCG CCTGCTCTCG CCGGTCCGCA AAGGACCGCG CGGCACCGAA GCCCTCAACC GCCTGGCCCG CGAAGCCCTG CACGAATCGG CCAGCAACTA CTGGTATCCA GGCCGACCCG TCATGATCCT GGAGAACGAC TACAATCTGG GACTGTTCAA CGGAGATGTG GGCATCGCCT TGCATGTGGA GGGGACCCTG CGGGTGTTTT TCGCCGGAAC CGAAGGACTG GAGTCCCATT CCCCGGCCCG ACTGCCCAGG CACGAGACAT GTTACGCCAT GACCGTGCAC AAGAGCCAGG GCTCGGAGTT CGGACACACC GTGCTGATCC TGCCGGAAGA ACCCTGCCCG GTCCTGGGTC GCGAACTTCT GTACACGGCC CTGACCCGCG CCAAGAAACG CTTCACGCTG TTGGGCACGG CTGAGCAGGT CAAGGATGCC ATAGAGAGCC CGGCCCGCCG CGATTCGGGG CTAGGGGAGA TGCTGACAAG TACCTGA
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Protein sequence | MFASPAILPR LAASTLFSEA DLYQARFAAS LAREGHANLV AGLTALVSLA VREGHVCLHL GDEGVRERLA ALGLDGTHAC QLTGVVGAPG SGLPLILDGE RLYFSRFFRD EEALARAFMR LAGAPPRDIP ADLLPDIFKT KGDETDWQDV ACFAALRSRL CVISGGPGTG KTTTVARILA LASRMHTGAN FRIRLAAPTG KAASRMTEAL AEAFPEGSQL PELNACLAQG AQTVHRLLGW SSGGFRHCQG NPLPLDMLVV DEASMLDLEL AARLMDALPD EASLVLLGDR NQLASVEAGA VLANLCREDI VNAFSPDFTA YAAKAGAQGL TATGIPVPLT DHVVELKKSW RFGQHSGIAA LSTLIRDGQA QMAGELLVEG RTDLEMLPCT GQANLTATLT PLLREAFRGL GGTTDPTRAF EIFGTLRLLS PVRKGPRGTE ALNRLAREAL HESASNYWYP GRPVMILEND YNLGLFNGDV GIALHVEGTL RVFFAGTEGL ESHSPARLPR HETCYAMTVH KSQGSEFGHT VLILPEEPCP VLGRELLYTA LTRAKKRFTL LGTAEQVKDA IESPARRDSG LGEMLTST
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