Gene Dbac_0346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_0346 
Symbol 
ID8375994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp404959 
End bp406398 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content60% 
IMG OID644999587 
Productprotein serine/threonine phosphatase 
Protein accessionYP_003156889 
Protein GI256828161 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2208] Serine phosphatase RsbU, regulator of sigma subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTCGGCG CACATCTGGT CGGGGCCCTT TTTTTGCGGC ACGTCCTTGT GCGCCTCTTC 
GTCCGCCCTT TGCCTGTCCA GCGTCAAGCC ACGCGTCTGC TGTTCCTTGA TTTCATCGTC
TTTGTGGGCA CGGGCCTCGG CGTTGGAGTG TATCACAATC TGGTTTGGGG CTTTCCGGTT
TCAAGCGGTC TGGAGGTCGT CATCGGTTTT GCCACCATCG GCCTTTTTGC CGCCCTGGAT
CTGAGCCTCG AATGGGAATA TCGGATCATC AAACAGGCGC ATTTTCTGGA ACAAAGCCTT
CCGGACTCGA AGGCGTTCTT CCCGCAGACC CGCAGGTTTG CGCTGCTGGC TTCCGGGATC
ATCATCTTTG TGACCATTGT CCTGCTTCTG CTTCTGGTGC GCGACATCTC CTGGCTCAAG
GCGCAGGATC AGGCCGCTGC CCTGGGTTTG TCCTTTCTGC TGCGGTCCGT GGTGCTGGAG
GTTCTGTTTG TCATGGGCGT CCTCTTGGTG CTGACCATGC TGCTCGTTTT TTCCTACGCC
AGAAACCTGG ACATCCTCTT CGAGAATCAG ACCAAGGTTC TGGAGCGGGT CAGTCAGGGG
CGCCTGGACA GCAAGGTTCC GGTGGTCACC AATGACGAGT TCGCGGTCAT CGCCGGGCAC
ACCAACTTCA TGATCGATCG CCTCGTGGAG CGAGAGCAGA TGGCGCAGGG ACTTGAATTG
GCCAGGCAGA TTCAGACCAG CCTGCTGCCG ACGTTCACCC CCTTTCTGCC CGGGGCGCGG
ATTTTCGGGA CCAGCCTTTT CTGCGACGAG ACCGGGGGGG ATTTTTACGA CTACATGGTG
CGCGACGGCG AACATGGCCC GCAGCTTGTG ATCATGATCG GGGATGTCAC CGGGCATGGA
GTGGGATCGG CCCTGCTCAT GGCTTCAGTC AGGGCGTACA TGAAAGCTCA TTTGTTGCAG
ACGAGCGATC TGGCCGAGGT CATGAACCGG ACAAACACGC TCATTTCCAG GGATGTCGCA
GGCAGCGGTC ATTTCGTAAC GGTCTTCCTG CTGTCTTTCT GCCCGATCGG CCGCAGGGTC
GAGTGGGTGG GCGCGGGGCA TGACCCGGCG ATCTTTCAGC CTTTTGACGG CGGCGAAGTC
CGCAGCCTTG CGGGTCGGGA TATACCGCTC GGCGTGGACC CGACCTGGCG GTATGGGGTA
ACCGAGGACC GGCTTGGCGA GGGCGTCCTG CTGATGGGAA CGGACGGAAT CTGGGAGGCG
GTCGACGCGC GGAAGACCAT GTTCGGCAAG GAGCGCATGC TCAAAGTGCT GCGTGAAAAC
GTCATGGCTT CGCCGCAGGA GATCGCGGAG CGGATCTTGA CGGCGGTGGA TTCGTTCACG
GGCAATGCCC GTGTCGAGGA TGACCGGACC GTCGTTATTG CCCGTTTGAC GGAGAGTTGA
 
Protein sequence
MLGAHLVGAL FLRHVLVRLF VRPLPVQRQA TRLLFLDFIV FVGTGLGVGV YHNLVWGFPV 
SSGLEVVIGF ATIGLFAALD LSLEWEYRII KQAHFLEQSL PDSKAFFPQT RRFALLASGI
IIFVTIVLLL LLVRDISWLK AQDQAAALGL SFLLRSVVLE VLFVMGVLLV LTMLLVFSYA
RNLDILFENQ TKVLERVSQG RLDSKVPVVT NDEFAVIAGH TNFMIDRLVE REQMAQGLEL
ARQIQTSLLP TFTPFLPGAR IFGTSLFCDE TGGDFYDYMV RDGEHGPQLV IMIGDVTGHG
VGSALLMASV RAYMKAHLLQ TSDLAEVMNR TNTLISRDVA GSGHFVTVFL LSFCPIGRRV
EWVGAGHDPA IFQPFDGGEV RSLAGRDIPL GVDPTWRYGV TEDRLGEGVL LMGTDGIWEA
VDARKTMFGK ERMLKVLREN VMASPQEIAE RILTAVDSFT GNARVEDDRT VVIARLTES