Gene Dbac_0260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_0260 
SymbolasnC 
ID8375901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp307056 
End bp308438 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content59% 
IMG OID644999495 
Productasparaginyl-tRNA synthetase 
Protein accessionYP_003156803 
Protein GI256828075 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0017] Aspartyl/asparaginyl-tRNA synthetases 
TIGRFAM ID[TIGR00457] asparaginyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAACT TGAGAGTGGC CGATATCCTG TTGTCCGAGG CGGAAGTTGA ATCACTGGTG 
GTGCAGGGCT GGGTGCGGAC CAAACGCGAA AGCAAGGAAT TCGTGTTTCT GGAAATAAAC
GACGGGTCGT GCCTCAAGAA TCTGCAAGCC ATCGTCGACG CCGGTGCCGT CGGCTTTGAA
CACATGGACC GGATCGGCAC CGGCGCGGCC GTAAGTCTGA CCGGGACGCT GGTGGAATCC
CCCGGGCAGG GTCAGAAGTG GGAACTCAAG GCCCGCGAGC TGAAAGTCCT CGGTGAGGCC
GACGCCACGT ACCCTTTGCA GAAGAAGCGC CACACGGATG AGTACCTGCG CACCATCGCT
CATCTGCGTC CCCGAACCAA CAAGTTCGGC GCCCTGAACC GTATCCGGGC CGAGCTGTCC
TACGGCGTGC ATCAGTTTTT CCGCGAGCAG GGTTTTTTCA ACGTCCATGC GCCCATCATT
ACCGGATCGG ACTGCGAAGG TGCGGGAGAG ATGTTTCAGG TCACCACCCT TGATCTGTCC
AATGTTCCGA AAAAGAACGG CAAGGCCGAC TTCGACCAGG ATTTTTTCGG CAAGGAGGCG
TCGCTTACGG TCTCCGGGCA GCTTGCGGCC GAGAATCTGG CCTGCGCCCT GGGCCGGGTC
TATACGTTCG GGCCGACTTT CAGGGCCGAG AATTCCAATA CGCCCAAGCA CGCCGCCGAG
TTCTGGATGA TCGAGCCGGA GATGGCCTTC GCGGGCCTTT CCGACAACAT GGATCTGGGC
GAGAGCTGCA TCAAATGGCT CATCACCCAT CTTATGGACC ATTGCCGAGA CGACTTGGAA
CTTTTCGGCA ATTTCGTGGA CAAGGGCCTG TTCGCCACCC TGGACAACAT CCTGGCGAAG
CCGTTCATCC GTTTGCCCTA CGCGGAGGCG GTGACCATCC TCAAGAGCGC ATCCCGCACT
TTCGAGTTTC CGGTGGATTT CGGCACGGAT CTGCAGACCG AGCACGAGCG GTATCTGACC
GAGGATCATT TCAAGCAGCC GGTCATCGTT TTCGACTACC CCAAGGAGAT CAAGGCCTTC
TATATGCGTC TCAATGACGA CGACAAAACC GTGGGCGCCA TGGATGTGCT TGTGCCGCGC
ATCGGGGAGC TCATCGGCGG CAGCGCCAGG GAAGAGCGTC TGGACGTGCT CGAGCGACGC
ATCGAAGAAC TCGGCCTGCC GAAGGAGGAT TACTGGTGGT ATCTGGACCT GCGCCGTTTC
GGCTCGGTGC CGCACGCCGG GTTCGGCATG GGCTTTGAGA GACTGCTCAT GCTGGTGACC
GGCATCGCCA ATATCCGCGA CGTCATTCCG TTCCCCAGAA CCCCCCGGCA TCTGGAGTTT
TGA
 
Protein sequence
MKNLRVADIL LSEAEVESLV VQGWVRTKRE SKEFVFLEIN DGSCLKNLQA IVDAGAVGFE 
HMDRIGTGAA VSLTGTLVES PGQGQKWELK ARELKVLGEA DATYPLQKKR HTDEYLRTIA
HLRPRTNKFG ALNRIRAELS YGVHQFFREQ GFFNVHAPII TGSDCEGAGE MFQVTTLDLS
NVPKKNGKAD FDQDFFGKEA SLTVSGQLAA ENLACALGRV YTFGPTFRAE NSNTPKHAAE
FWMIEPEMAF AGLSDNMDLG ESCIKWLITH LMDHCRDDLE LFGNFVDKGL FATLDNILAK
PFIRLPYAEA VTILKSASRT FEFPVDFGTD LQTEHERYLT EDHFKQPVIV FDYPKEIKAF
YMRLNDDDKT VGAMDVLVPR IGELIGGSAR EERLDVLERR IEELGLPKED YWWYLDLRRF
GSVPHAGFGM GFERLLMLVT GIANIRDVIP FPRTPRHLEF