Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_0233 |
Symbol | mdoD |
ID | 8375869 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | - |
Start bp | 273950 |
End bp | 275542 |
Gene Length | 1593 bp |
Protein Length | 530 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644999463 |
Product | glucan biosynthesis protein D |
Protein accession | YP_003156776 |
Protein GI | 256828048 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3131] Periplasmic glucans biosynthesis protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGCGTC AAACCCTGTT CACGCTGATC GTCCCGATCA TTCTTGGCGC CTTCCTGGCC GCATCCGTGT CCGCCATGGC GGCCACGGAT GCGCCAACGC CCACCGGCGG AACGGCCTTC GACTACGCCT GGCTCAAGGG CCGCGCCCGG GCCCTGGCCG CATCGCCCCA TGTCAGCCAT GAAGGCGAAC TGCCAAAGGC ATTGCAGAAC CTGACCTGGG ACAACTACAT GCAGCTCTCC TTCGACTCGG AACATGCCTT GTGGCAGGAT GAAAAGTCCC TGTTCCGAGC CGAGCTCTTC CATCTGGGGC TGTATTTCAG GACTCCCATC ACCATTTACG AACTGCAGGA CGGAAAGGTC AAAGAGATCG ACTACACGCC TGACCTCTTC AAATACGGAA ACTCCGGAAT AAAAGGCAAG GATCTGCCCA AGGACCTCGG CTTCGCCGGA TTCCGCTTCC GCTACCACAC CGACTGGGCC CGTGATCTGG TGGCCTTTTT GGGCGCGAGC TACTTTCGCG CCGTGGGCGG AGAAATGCAG TACGGGCTTT CCGCCCGCGG ACTGGCCGTG GACACGGCCC TGCCGCGCCC CGAAGAGTTC CCCCTCTTCA CGCATTTCTG GCTGGAAAAA CCCCGTCCCG GGAGCGACAC CGCCACGGTC TACGCCCTGC TCGATTCGCC CAGCGTGACC GGGGCCTACC GCTTCGACAT CCGCCCGGGG CAGACCCTGA GCATGAAGGT GGACGCGGCC CTCTACCCGC GCAAACCCAT CGAACGCCTG GGCGTCGCGC CCCTGACCAG CATGTTTCTG AACGGCGAGA ACGACCGCCG CATGGGCTAC GACTGGCGGG CGGAAATCCA CGACTCCGAT GGGCTGGCCA TCCACAACGG CAACGGCGAA TGGATCTGGC GGCCGCTGGA AAACCCGCCG TTCCTGCGCT TCAACGCCTT CATGGACCAG AACCCGCGCG GTTTCGGCCT GTTCCAACGC GACCAGAACT TCGACCACTA CCAGGACGAC GGCGTGTTCT ACGACAAACG CCCCAGCGTC TGGGTGGAAC CCGTGGGCGA CTGGGGCGCG GGCTCGGTGC AGCTGGTCGA GATTTCCCAT GTCGACGAGA CCTTCGACAA CATCGTGGCC TTCTGGAACC CCGCCGCTCC GGTGGAAGCC GGGCAGGAAA TGCTTTTCAG CTACAATCTG TACTGGGGCA CCAATCCGCC CGCGCCCGGC AACCTGGCCC GAGTGGTCGA CACCTTCACG GGCCTTGGCG GCGTGGTCGG CAAAAAGCGC GAATACTACA GCAAGCGCTT CGCCGTGGAC TTCGCCGGCG GCGACCTGGC CATGATCGCC AAGGACGCGA AAATCACCCC GGTCCTGAGC ACCTCGGCCG GACGCATCGA AATCACCTCG GTGCGGCCAC AGCACGCCAT AAACGGCTTC CGCTGCATGT TCGACGTGGT CCCGCCCGAC GAAACCCAGA ACCCCATCGA CCTGCGTCTG CACCTTGAAG CCGACGGCCG CCGCATCAGC GAAACTTGGG TCTACCAGAT GACGCCCCCG GCCATGACGG ACCGTACGCT CTACAATCCC TGA
|
Protein sequence | MKRQTLFTLI VPIILGAFLA ASVSAMAATD APTPTGGTAF DYAWLKGRAR ALAASPHVSH EGELPKALQN LTWDNYMQLS FDSEHALWQD EKSLFRAELF HLGLYFRTPI TIYELQDGKV KEIDYTPDLF KYGNSGIKGK DLPKDLGFAG FRFRYHTDWA RDLVAFLGAS YFRAVGGEMQ YGLSARGLAV DTALPRPEEF PLFTHFWLEK PRPGSDTATV YALLDSPSVT GAYRFDIRPG QTLSMKVDAA LYPRKPIERL GVAPLTSMFL NGENDRRMGY DWRAEIHDSD GLAIHNGNGE WIWRPLENPP FLRFNAFMDQ NPRGFGLFQR DQNFDHYQDD GVFYDKRPSV WVEPVGDWGA GSVQLVEISH VDETFDNIVA FWNPAAPVEA GQEMLFSYNL YWGTNPPAPG NLARVVDTFT GLGGVVGKKR EYYSKRFAVD FAGGDLAMIA KDAKITPVLS TSAGRIEITS VRPQHAINGF RCMFDVVPPD ETQNPIDLRL HLEADGRRIS ETWVYQMTPP AMTDRTLYNP
|
| |