Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_0194 |
Symbol | |
ID | 8375829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | + |
Start bp | 227529 |
End bp | 229373 |
Gene Length | 1845 bp |
Protein Length | 614 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644999423 |
Product | DNA polymerase III, subunits gamma and tau |
Protein accession | YP_003156737 |
Protein GI | 256828009 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
TIGRFAM ID | [TIGR00678] DNA polymerase III, delta' subunit [TIGR02397] DNA polymerase III, subunit gamma and tau |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCCAGG AAAGCCTTAC CGCCCGTTAC CGCCCTCAGA GTTTTGCAGA AGTGGCCGGC CAGGACGCTG TCAAGCGCAT CCTTTCCCGG GCTGCGTCCA CCGGACGGGT CGCGCCGGCC TATCTGTTCA GCGGGACGCG CGGGGTGGGC AAGACCACCC TGGCCCGCAT CTTCGCCAAG GCCCTGAACT GTCAGAACGG CCCCGCCTCC GAGCCCTGCA ACCAGTGCCC GATCTGCCGC CAGATCACCC TCGGTTCGGC CGTGGACGTG GTCGAGATCG ACGGCGCCTC CAACACCGGC GTGGACAATG TCCGCCGCCT GAAAGAGGAC GTGGGCTACG CGCCGCTGGA GTGCCGCTAC AAGGTCATCA TCATCGACGA AGCGCACATG CTCTCCAAGC AGGCCTTCAA CGCGCTCCTC AAAACCCTCG AAGAGCCGCC AGGCCACGTG ACCTTCATCA TGGCCACCAC GGAGCCGGAA AAATTTCCCC AGACCATCAT CAGCCGTTGC CAGCATTTCG TCTTCAAGCG TCTGCCCCAG GCCGAACTGG TGCGGCACCT GGATGGCGTG CTCAAGCGCG AATCCTTTCC GGCCGAGCCT TCCGCCGTGA CTCTTGTCGC CCGGCGCGGG GCCGGATCGG TGCGCGACGG CATGTCGCTT TTGGGCCAGG TCATGGCCCT GGGTTCCGAT TCCCTGACCC TGGCCGACGT GCGCGAGGTG CTGGGCCTGG CCGGTGGCGA GGTCTTTGTG CGCCTGATCG AATGCGTGCA GTCCCGCGAC CTGCAAGGCC TGCACGCCCT GCTGACCCAG ATCCTGGACC AGGGCGTGGA CCTGGGTTTC TTCCTGCGCG AGCTGGCCGG TTGCTGGCGC AATCTTTTTC TGTTGCACCA GATGGGTGAC GCCGCGCGAA GCATCATCGA CCTGCCGGCC GAAGAGGTGG ACATCTGGGC CGCTGTCGCG CCCGGCTTTT CCCTTGGGCA TTTGCACGCG GCCTGGCAGA TGACCATGGA CAGCCAGCGC AAGGTGCTGA CCAGCATGGA GCCGGCCCTG GCCCTGGAAC TTTTGCTCCT CAATCTGGCC TGCCTGCCGG ATCTGCTGGC CATGGGCGCC GGTGACGCCC GCCCCGGCGG CGATCCCGGC GGCGGAGCTG CCCCGGGGCG CCCCGCCCCG CCCCGGCCTC AGGCACCGCC CGTCCCGCCC CGGTCCGTTT CCGCGCCGGC GCGCCCTGCC TCGCAGCCTC CGGCGTCGAC GGTTACGCTG CGGGAAGCGC AGGCTGATTT CAAAAGCCGG GCCGATGGTC CCGGCGCTGT TCCGCCCAGC TCCGCCACGC AGGCCGCGCC TGCCACGCAG TTCGCGCCCG TCGCCCAGCC CGCGCCCGTC CCCCAGCCCG CGCCCGTCGC CCAGCCCGCG CCCGTCGCCC AGGCCGCGCC TGTCGCACAG GCCGCGCCTG TCGCACAGGC CGCGCCTGCC GGTCCCAGGA ATTGGGCCGG ATTCGTGGCT TTTTGCGCCA AGCGGGGGGA GGGGGCAAAG CCTCTGCCAG GTCTGGACAA GGCCCAAGGG GAGCTCCGGG GCGCGGAGCT TGTGCTGACC AGCCAGCATA TTTTTTTGTG CGACCGCTTA AAAGCCAGCA TGCCTTTGTT GACGGAAGCG GCGCGTGCCT ATTTCGGCCC GGGGGTGGCC GTGCGGGTTG ATGCCCCTGC GGAGTCGGTG CGCAGGACCC GCACCGAATT GCGCGAGCTG GCGCTGGCCG ATCCCGTGGT GCGTGAGGCT CAGGAAAAAT TTCAGGCCCG GATTGTCGAG GTCCGGCCCC CAGCAAACGG AAATTCCAAG GAGAGCGAGA TATGA
|
Protein sequence | MSQESLTARY RPQSFAEVAG QDAVKRILSR AASTGRVAPA YLFSGTRGVG KTTLARIFAK ALNCQNGPAS EPCNQCPICR QITLGSAVDV VEIDGASNTG VDNVRRLKED VGYAPLECRY KVIIIDEAHM LSKQAFNALL KTLEEPPGHV TFIMATTEPE KFPQTIISRC QHFVFKRLPQ AELVRHLDGV LKRESFPAEP SAVTLVARRG AGSVRDGMSL LGQVMALGSD SLTLADVREV LGLAGGEVFV RLIECVQSRD LQGLHALLTQ ILDQGVDLGF FLRELAGCWR NLFLLHQMGD AARSIIDLPA EEVDIWAAVA PGFSLGHLHA AWQMTMDSQR KVLTSMEPAL ALELLLLNLA CLPDLLAMGA GDARPGGDPG GGAAPGRPAP PRPQAPPVPP RSVSAPARPA SQPPASTVTL REAQADFKSR ADGPGAVPPS SATQAAPATQ FAPVAQPAPV PQPAPVAQPA PVAQAAPVAQ AAPVAQAAPA GPRNWAGFVA FCAKRGEGAK PLPGLDKAQG ELRGAELVLT SQHIFLCDRL KASMPLLTEA ARAYFGPGVA VRVDAPAESV RRTRTELREL ALADPVVREA QEKFQARIVE VRPPANGNSK ESEI
|
| |