Gene Dbac_0194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_0194 
Symbol 
ID8375829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp227529 
End bp229373 
Gene Length1845 bp 
Protein Length614 aa 
Translation table11 
GC content68% 
IMG OID644999423 
ProductDNA polymerase III, subunits gamma and tau 
Protein accessionYP_003156737 
Protein GI256828009 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR00678] DNA polymerase III, delta' subunit
[TIGR02397] DNA polymerase III, subunit gamma and tau 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCAGG AAAGCCTTAC CGCCCGTTAC CGCCCTCAGA GTTTTGCAGA AGTGGCCGGC 
CAGGACGCTG TCAAGCGCAT CCTTTCCCGG GCTGCGTCCA CCGGACGGGT CGCGCCGGCC
TATCTGTTCA GCGGGACGCG CGGGGTGGGC AAGACCACCC TGGCCCGCAT CTTCGCCAAG
GCCCTGAACT GTCAGAACGG CCCCGCCTCC GAGCCCTGCA ACCAGTGCCC GATCTGCCGC
CAGATCACCC TCGGTTCGGC CGTGGACGTG GTCGAGATCG ACGGCGCCTC CAACACCGGC
GTGGACAATG TCCGCCGCCT GAAAGAGGAC GTGGGCTACG CGCCGCTGGA GTGCCGCTAC
AAGGTCATCA TCATCGACGA AGCGCACATG CTCTCCAAGC AGGCCTTCAA CGCGCTCCTC
AAAACCCTCG AAGAGCCGCC AGGCCACGTG ACCTTCATCA TGGCCACCAC GGAGCCGGAA
AAATTTCCCC AGACCATCAT CAGCCGTTGC CAGCATTTCG TCTTCAAGCG TCTGCCCCAG
GCCGAACTGG TGCGGCACCT GGATGGCGTG CTCAAGCGCG AATCCTTTCC GGCCGAGCCT
TCCGCCGTGA CTCTTGTCGC CCGGCGCGGG GCCGGATCGG TGCGCGACGG CATGTCGCTT
TTGGGCCAGG TCATGGCCCT GGGTTCCGAT TCCCTGACCC TGGCCGACGT GCGCGAGGTG
CTGGGCCTGG CCGGTGGCGA GGTCTTTGTG CGCCTGATCG AATGCGTGCA GTCCCGCGAC
CTGCAAGGCC TGCACGCCCT GCTGACCCAG ATCCTGGACC AGGGCGTGGA CCTGGGTTTC
TTCCTGCGCG AGCTGGCCGG TTGCTGGCGC AATCTTTTTC TGTTGCACCA GATGGGTGAC
GCCGCGCGAA GCATCATCGA CCTGCCGGCC GAAGAGGTGG ACATCTGGGC CGCTGTCGCG
CCCGGCTTTT CCCTTGGGCA TTTGCACGCG GCCTGGCAGA TGACCATGGA CAGCCAGCGC
AAGGTGCTGA CCAGCATGGA GCCGGCCCTG GCCCTGGAAC TTTTGCTCCT CAATCTGGCC
TGCCTGCCGG ATCTGCTGGC CATGGGCGCC GGTGACGCCC GCCCCGGCGG CGATCCCGGC
GGCGGAGCTG CCCCGGGGCG CCCCGCCCCG CCCCGGCCTC AGGCACCGCC CGTCCCGCCC
CGGTCCGTTT CCGCGCCGGC GCGCCCTGCC TCGCAGCCTC CGGCGTCGAC GGTTACGCTG
CGGGAAGCGC AGGCTGATTT CAAAAGCCGG GCCGATGGTC CCGGCGCTGT TCCGCCCAGC
TCCGCCACGC AGGCCGCGCC TGCCACGCAG TTCGCGCCCG TCGCCCAGCC CGCGCCCGTC
CCCCAGCCCG CGCCCGTCGC CCAGCCCGCG CCCGTCGCCC AGGCCGCGCC TGTCGCACAG
GCCGCGCCTG TCGCACAGGC CGCGCCTGCC GGTCCCAGGA ATTGGGCCGG ATTCGTGGCT
TTTTGCGCCA AGCGGGGGGA GGGGGCAAAG CCTCTGCCAG GTCTGGACAA GGCCCAAGGG
GAGCTCCGGG GCGCGGAGCT TGTGCTGACC AGCCAGCATA TTTTTTTGTG CGACCGCTTA
AAAGCCAGCA TGCCTTTGTT GACGGAAGCG GCGCGTGCCT ATTTCGGCCC GGGGGTGGCC
GTGCGGGTTG ATGCCCCTGC GGAGTCGGTG CGCAGGACCC GCACCGAATT GCGCGAGCTG
GCGCTGGCCG ATCCCGTGGT GCGTGAGGCT CAGGAAAAAT TTCAGGCCCG GATTGTCGAG
GTCCGGCCCC CAGCAAACGG AAATTCCAAG GAGAGCGAGA TATGA
 
Protein sequence
MSQESLTARY RPQSFAEVAG QDAVKRILSR AASTGRVAPA YLFSGTRGVG KTTLARIFAK 
ALNCQNGPAS EPCNQCPICR QITLGSAVDV VEIDGASNTG VDNVRRLKED VGYAPLECRY
KVIIIDEAHM LSKQAFNALL KTLEEPPGHV TFIMATTEPE KFPQTIISRC QHFVFKRLPQ
AELVRHLDGV LKRESFPAEP SAVTLVARRG AGSVRDGMSL LGQVMALGSD SLTLADVREV
LGLAGGEVFV RLIECVQSRD LQGLHALLTQ ILDQGVDLGF FLRELAGCWR NLFLLHQMGD
AARSIIDLPA EEVDIWAAVA PGFSLGHLHA AWQMTMDSQR KVLTSMEPAL ALELLLLNLA
CLPDLLAMGA GDARPGGDPG GGAAPGRPAP PRPQAPPVPP RSVSAPARPA SQPPASTVTL
REAQADFKSR ADGPGAVPPS SATQAAPATQ FAPVAQPAPV PQPAPVAQPA PVAQAAPVAQ
AAPVAQAAPA GPRNWAGFVA FCAKRGEGAK PLPGLDKAQG ELRGAELVLT SQHIFLCDRL
KASMPLLTEA ARAYFGPGVA VRVDAPAESV RRTRTELREL ALADPVVREA QEKFQARIVE
VRPPANGNSK ESEI