Gene Dbac_0193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_0193 
Symbol 
ID8375828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand+ 
Start bp226523 
End bp227446 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content63% 
IMG OID644999422 
Productbranched-chain amino acid aminotransferase 
Protein accessionYP_003156736 
Protein GI256828008 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID[TIGR01122] branched-chain amino acid aminotransferase, group I 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTCAGA AAGCTGACAA GATTTGGTTC GACGGTAAGC TCGTGCCCTG GGACGAGGCG 
CAGGTCCACG TTCTGACCCA CACCCTGCAT TACGGCGTAG GCGTTTTCGA GGGCATCCGC 
TGCTACGTCT GTTCCGACGG AAGCTCGGCC GTATTCCGGT TGCAGGAGCA TGTGGAGAGG 
CTCTTTCTGT CGGCCAAGAT CAACGAGATG GTCATCCCCT TCACGCAGCA GCAGATTTTC 
GACGCCATCA TCGACACCTT GAAAGCCAAC CGCCAGCCCG AGGGCTACGT CCGGCCCCTG 
TGCTTCATCG GCGCCGGAGC CATGGGCGTC TTTCCCGGCG ACAACCCCAT CCAGACCATC 
ATCGCCACCT GGCCGTGGGG CGCGTATCTT GGCGCCGAAG CCCTGGAGAA AGGCATCCGC 
ATCAAGACCT CGACCTTCAC CCGGCATCAC GTCAACGTCA TGATGACCAA GGCCAAGACC 
TGCGGCAACT ACGTCAACTC CGTGCTGGCC AAGCGCGAGG CCCTGGCCGA CGGCTATCAC 
GAGGCCCTCA TGCTCGACGC CGAAGGGTAT GTGTCCGAGG CGACCGGGGA AAATATTTTC 
ATGGTCCGCA ACGGCGTGGT CAAGACTCCG CCCCTGGGCT CCATCCTGGC CGGCATCACC 
CGCGAGACGC TCATGATCCT GGCCGAGGAC CTCGGCTACA CCGTCGTCGA GGACCGTTTC 
ACCCGTGACG AGCTGTACTG CGCCGACGAG GCCTTTTTCA CCGGTACGGC GGCGGAGGTC 
ACGCCCATCC GCGAAATCGA CCGCCGCACC ATCGGCCAGG GCAGTCGCGG CCCGGTCACG 
GCGGCCTTGC AGGACGCCTA TTTCAAGCTG CTGCGCGGCG ACAATCCGAA GTACGGAAAG 
TGGCTGGCCC GCTACACGAT CTAG
 
Protein sequence
MVQKADKIWF DGKLVPWDEA QVHVLTHTLH YGVGVFEGIR CYVCSDGSSA VFRLQEHVER 
LFLSAKINEM VIPFTQQQIF DAIIDTLKAN RQPEGYVRPL CFIGAGAMGV FPGDNPIQTI 
IATWPWGAYL GAEALEKGIR IKTSTFTRHH VNVMMTKAKT CGNYVNSVLA KREALADGYH 
EALMLDAEGY VSEATGENIF MVRNGVVKTP PLGSILAGIT RETLMILAED LGYTVVEDRF 
TRDELYCADE AFFTGTAAEV TPIREIDRRT IGQGSRGPVT AALQDAYFKL LRGDNPKYGK 
WLARYTI