Gene Dbac_0129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_0129 
Symbol 
ID8375762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp161337 
End bp162305 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content57% 
IMG OID644999357 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_003156673 
Protein GI256827945 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACTTAC GAAAACGAGT TCTTATCACG GGCGGTTCCG GATTTCTGGG ATCACACCTC 
TGCGAACGTC TGCTGGATGA AGGCTGCGAA GTCATCTGCG TGGACAATTT TTTCACCAGC
TCGCGCCAGA ACATCGAGCA TCTGCTCCCG AACCCGCGTT TCGAGCTGAT CCGCCACGAC
GTGACCTTCC CGCTCTACCT GGAAGTGGAC GAGATCTACA ATCTGGCCTG CCCGGCCTCG
CCCATCCATT ACCAGCACGA CCCGGTGCAA ACCATCAAGA CCTGCGTGCA CGGGGCCATC
AACATGCTGG GCCTGGCCAA GCGTCTGCGC ATCCCGATCT TCCAGGCCTC GACCTCCGAA
GTCTACGGCG ACCCCGACGT CCACCCGCAG CCGGAATCCT ACTGGGGCAA CGTCAACCCC
ATCGGCCACC GCTCCTGCTA CGACGAAGGC AAACGCTGTG CGGAATCCCT CTTCTTCGCC
TACCACCGCC AGCACGGCCT GCCCATCAAG GTCGGAAGAT TGTTCAACAC CTACGGCCCG
CGAATGCACC CCAACGACGG TAGGGTTGTC TCAAATTTCA TCATGCAGGC CCTGCAAGGC
AAGCCCATCA CCATCTACGG GGATGGCTCG CAGACACGGT CCTTCTGCTA CGTGGATGAT
CTGGTGGAGC TGATGCTGCG GTTCATGCGC AATGATCATG AGTTCTGCGG CCCGCTGAAT
ATGGGGAACC CTGGGGAATT CACGATTCTC GAGTTGGCCC AGCAGGTGAT TGAGATGACG
GGAAGCTCAT CAAAGATTTC ACTCGAACCG CTGCCCACGG ACGACCCGAA ACAAAGAAAG
CCCGACATTA CGCTGGCTAG GGAACGTTAT GGGTGGGAAC CGCAGGTTGG CTTACGCGAA
GGACTGGTGC AGACAATCGC GTACTTTCAA AATCTCCTCC ATCCTAATGG AATTCCAGAC
GAATTTTGA
 
Protein sequence
MHLRKRVLIT GGSGFLGSHL CERLLDEGCE VICVDNFFTS SRQNIEHLLP NPRFELIRHD 
VTFPLYLEVD EIYNLACPAS PIHYQHDPVQ TIKTCVHGAI NMLGLAKRLR IPIFQASTSE
VYGDPDVHPQ PESYWGNVNP IGHRSCYDEG KRCAESLFFA YHRQHGLPIK VGRLFNTYGP
RMHPNDGRVV SNFIMQALQG KPITIYGDGS QTRSFCYVDD LVELMLRFMR NDHEFCGPLN
MGNPGEFTIL ELAQQVIEMT GSSSKISLEP LPTDDPKQRK PDITLARERY GWEPQVGLRE
GLVQTIAYFQ NLLHPNGIPD EF