Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_0102 |
Symbol | |
ID | 8375735 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | - |
Start bp | 123105 |
End bp | 126260 |
Gene Length | 3156 bp |
Protein Length | 1051 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644999331 |
Product | transporter, hydrophobe/amphiphile efflux-1 (HAE1) family |
Protein accession | YP_003156647 |
Protein GI | 256827919 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACATT TTTTCATCAA TCGCCCGGTA TTCGCCTGGG TTCTGGCCAT CGCCGCCATG CTTGGCGGCG TGCTGGCCAT AACGGGCCTG CCCATCTCCC AGTATCCGCC CATCGCTCCT CCATCGGTGG CCATCAGCGC GACCTATCCA GGCGCGTCGG CCAAGACCCT GGAAGATGCG GTCACCCAGG TCATCGAACA GAAGATGAAG GGCATCGACA ATCTGGACTA CATGTCCTCG ACCAGCCAAT CCTCGGGTCA GGCCGAAATC ACCCTGACCT TCAAGGCCGG CACCAACCCG GACATTGCCC AGGTACAGGT CCAGAACAAG CTGCAACTGG CCATGGCGCT GCTGCCGCAG GAAGTGCAGG CCCAGGGCGT GCAGGTCACC AAGGCGGTCA GGAACTTCGT ACAGGTGCTC GGCTTCGTTT CCGAAGACGG GTCCATGGCC AGGGCGCAGC TGGCCGACTA TGTGGCCGCC AATGTTCTTG ACGGCATGAG CCGCGTGGAA GGAGTCGGCG AGGTCACCCT GTTCGGCTCG CAGCACGCCA TGCGCATATG GCTCAATCCT GACCAGTTGC ATACCTACAG CCTCACCCCG GCGGACGTCG CCGCCGCCAT CAAGGCCCAG AACGCCCAGA TCTCCGCCGG TCAACTGGGC GGACTGCCTT CGGTTGCGGA ACAGCGCATC AACTTCACGG TCAGCGTCCA GGACCGTCTT CAGACTCCCG AGCAATTCCG GAACGTCCTC TTAAAGACCA ACACCGACGG ATCCACGGTG CGTTTGGGCG ACGTCGCCAA GGTGGAACTG GGGGCGGAAA ATTCGCAGGT CGTCTCCCGA TACAACGGTC AACCCTCGGC GGCCCTGGCC ATCAAGCTGG CCACCGGTGC CAATGCGCTG AAGACCGTCG AGGCCATCGC CGAATACACG GACAGCATCA GTTCGACCTT CCCCGCCGGA TTGAAGGTCG TGGAAGCATT CGACACCACG CCCTTCGTGC GCATCTCCAT CGAAGAGGTG GTCCGCACCC TGCTGGAGGC CGTGGTCCTG GTCTTTCTGG TCATGTACCT CTTTCTGCAG AACTTCCGGG CCACGCTCAT CCCGACCATC GCCGTGCCCG TGGTTCTGCT CGGCACCTTC GGGGTGCTGG CGGCCTTCGG CTATTCCATC AACACCCTGA CCATGTTCGC CATGGTCCTG GCCATCGGCC TGCTGGTGGA CGACGCCATC GTCGTGGTCG AAAACGTCGA ACGAATCATG CATGAAGACG GCTTGTCGGC CAGGGACGCG ACCCACCTGT CCATGACCCA GATCTCCGGG GCCCTGGTCG GCATCGCCCT GGTGCTGTCC GCCGTCTTCG TACCCATGGC CTTCTTCGGC GGCTCCACGG GCGTCATTTA CCGCCAGTTC TCCATCACCG TGGTCTCGGC CATGGTCCTC TCCGTCCTGG TGGCCCTGAT CCTGACCCCG GCCCTGTGCG CCACCATGCT CAGGCCTGCC AAGCCCGGCC AAGGCAAGCG CGGCTTCTTC GGCCTGTTCA ACCGTGGCTT CGACCGCACC GCGAACGGCT ATCAGAAGCT GGTCGGGTCC ATGACCCGGC GCTGGGGGCG ATCGATGATC CTCTACGCCC TCATCCTGGC CGCCATGATG TTCCTGTTCC AGCGGCTGCC CACGGGCTTT CTCCCGGACG AGGACCAGGG CATGCTCTTC GTGCAGGTCC AGTTGCCCAT CGGCGCGACC CAGGACCGCG CCCTGAATGT GCTGGAACGC ATCGAAACCC ACTTCCTGGA AGCCGAGAAG GACTCCGTGC AATCGCTCAT GGCCGTGGCG GGCTTCAGTT TCGCCGGCAG CGGCCAGAAC ACGGCCATGT GCTTCGTACG TCTGAAGGAC TGGAGCATGC GCAAGGGTCC CGACACGCAC GTCAAGGCCA TTGCCGGACG TGCCATGGCC GCCTTCTCGC AGTACCGCGA CGCGCAGGTC TTCGCCTTTG CCCCGCCGGC GGTGATGGAA CTGGGCAACG CGGCCGGCTT CGACTTCGAG TTGCAAGACA TGGCAGGCCT CGGCCACGAA AAGCTCACCG CCGCCCGCAA CCAGCTTCTC GGCATGGCCA GCCAGCATCC GGATCTGGCC ATGGTCCGCC CTAACGGCCT GGACAACACG CCGCAGTATC GCATCGACAT CGACTGGGAC AAGGCCGGCG CCCTGGGTCT GGCCGTGTCC GACGTGACCG GCGTCATCGC CACGGCCTGG GGCAGCTCCT ATGTCAACGA CTTCCTGGAC AAGGGGCGCG TCAAGAAGGT CATCATGCAG GGCGAGGCGC CCTACCGCAT GATGCCCGAA GACCTCGCCC GCTGGCACGT GCGCGGCAAA TCCGGCCAGA TGGTACCAAT GTCGAGCTTC GCCACGGCGC ACTGGACTTC GGGTTCGCCC CGTCTGGAGC GCTACAACGG CGTCCCGGCC ATGCAGATCC TCGGCGCGCC AGCACCGGGC AAGAGCTCGG GCCAGGCCAT GGCGACCATG GAGAACCTGG CCGGCCAGTT GCCTGAAGGC ATCGGCTACT CCTGGACGGG CCTGTCCTTC CAGGAACGCC AGGCCGGTTC CCAGACCGCC CTGCTCTACG GTCTCTCCAT CCTCGTGGTC TTCCTTTGCC TCGCGGCCCT GTACGAAAGC TGGAGCCTGC CGGCATCGGT CATCCTGGTC GTGCCCATCG GCGTCGTCGG GGCACTGGCC GCCGTCAGTC TGCGCGGCCT GACCAACGAC GTTTACTTCC AGGTCGGTCT GCTCACGACC ATGGGCCTGG CAGCCAAAAA CGCCATCCTC ATCGTCGAGT TCGCCAAAAG CCTGGCCGAA TCGGGCATGG ACCTCATGAC CGCAGTGGTC GAGGCGGCCA GACAGCGCCT GCGGCCCATC CTCATGACCT CCCTGGCCTT TGGCCTGGGC GTTCTGCCGC TGGCCCTGAA CTCCGGAGCG GGGTCCGGCG GGCAGAACTC CATCGGCACG GGCGTTATCG GCGGCACCAT CGCCTCGACC ATCATCGGCT CCCTGCTTAT CCCGGTCTTC TTCGTCATCG TGGCCAAGAG GGGACTCTCC CGCAAGGAAC CCAAAAACGC GACCACTCGC GCCATAATCC CCGGAGGCCA CCCATGCGAA GATTGA
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Protein sequence | MAHFFINRPV FAWVLAIAAM LGGVLAITGL PISQYPPIAP PSVAISATYP GASAKTLEDA VTQVIEQKMK GIDNLDYMSS TSQSSGQAEI TLTFKAGTNP DIAQVQVQNK LQLAMALLPQ EVQAQGVQVT KAVRNFVQVL GFVSEDGSMA RAQLADYVAA NVLDGMSRVE GVGEVTLFGS QHAMRIWLNP DQLHTYSLTP ADVAAAIKAQ NAQISAGQLG GLPSVAEQRI NFTVSVQDRL QTPEQFRNVL LKTNTDGSTV RLGDVAKVEL GAENSQVVSR YNGQPSAALA IKLATGANAL KTVEAIAEYT DSISSTFPAG LKVVEAFDTT PFVRISIEEV VRTLLEAVVL VFLVMYLFLQ NFRATLIPTI AVPVVLLGTF GVLAAFGYSI NTLTMFAMVL AIGLLVDDAI VVVENVERIM HEDGLSARDA THLSMTQISG ALVGIALVLS AVFVPMAFFG GSTGVIYRQF SITVVSAMVL SVLVALILTP ALCATMLRPA KPGQGKRGFF GLFNRGFDRT ANGYQKLVGS MTRRWGRSMI LYALILAAMM FLFQRLPTGF LPDEDQGMLF VQVQLPIGAT QDRALNVLER IETHFLEAEK DSVQSLMAVA GFSFAGSGQN TAMCFVRLKD WSMRKGPDTH VKAIAGRAMA AFSQYRDAQV FAFAPPAVME LGNAAGFDFE LQDMAGLGHE KLTAARNQLL GMASQHPDLA MVRPNGLDNT PQYRIDIDWD KAGALGLAVS DVTGVIATAW GSSYVNDFLD KGRVKKVIMQ GEAPYRMMPE DLARWHVRGK SGQMVPMSSF ATAHWTSGSP RLERYNGVPA MQILGAPAPG KSSGQAMATM ENLAGQLPEG IGYSWTGLSF QERQAGSQTA LLYGLSILVV FLCLAALYES WSLPASVILV VPIGVVGALA AVSLRGLTND VYFQVGLLTT MGLAAKNAIL IVEFAKSLAE SGMDLMTAVV EAARQRLRPI LMTSLAFGLG VLPLALNSGA GSGGQNSIGT GVIGGTIAST IIGSLLIPVF FVIVAKRGLS RKEPKNATTR AIIPGGHPCE D
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