| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_0042 |
|---|
| Symbol | |
|---|
| ID | 8375675 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | + |
|---|
| Start bp | 63104 |
|---|
| End bp | 64384 |
|---|
| Gene Length | 1281 bp |
|---|
| Protein Length | 426 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644999272 |
|---|
| Product | amidohydrolase |
|---|
| Protein accession | YP_003156588 |
|---|
| Protein GI | 256827860 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGTATCT TGATAAAAAA AGTGCGCCTG AATGGAGAGC TGGTCGATGT GCTCATCAAG
GGCAATCGTT TCGACTCCAT CGGAACGGAC GTGGACTCGT CCGCCGACGT GGTGATCGAC
GGGTCGGGCA AGGCCATCCT GCCATCCTTC CACAATGCCC ACACCCATGC GGCAATGACG
CTTCTGCGCG GCTATGCCGA CGATATGGAT CTGCATACAT GGCTGGCCGA TCACATCTGG
CCCTTCGAGG CCCGGCTGAC GGAGGATGAC ATCTATTGGG GCGCGAAGCT CGCCTGCCTT
GAGATGATCA AGTCCGGAAC GACCTTTTTC GCCGATATGT ACTGGCATTG GAAGGGCACG
GCCCGGGCCG TGACGGACAT GGGCATGCGT GCGGCGCTGT CCGCGGCATT TTTTGATTTC
GACGATCCGG TCCGTGCCGA AACCATGAAG CGGCAGGTCA TGGATCTGCA CGCCGCCAGC
GTCGCGTTTC CGGACCGGAT TCAGTTCATT CTCGGGCCTC ACGCCATCTA CACCGTGTCT
TCGGACTCCC TGCGCTGGCT GGGGGAATAC GCGAACCGGC ACGGTCTTCT GGTGCATCTG
CACCTTTCCG AGACGCAAAA AGAGGTTGAG GACTGTTTGG CCAAACATGG CAAAAGGCCG
GTGGAGTATC TGCACGAGCT GGGTCTTTTG GCCCCGAACC TGATCCTGGC GCATGCCGTG
TGGATGACCG GGAAGGAGAT GGAGCTGCTG GCCGGGCACG GGGTGCAGGT CGTGCACTGC
CCGGTCTCGA ACATGAAGCT GTGTTCCGGG CAGTTCGACT ACGCCGCCAT GCAGGCTCAT
GGCGTCACCG TGGCCCTGGG TACGGACGGC TGTTCCTCGA ACAACAATCT GGACATGATC
GAGGAAATGA AGATCGCCTC TCTGCTGGCC AAGGTCACGT CCATGGACCC CACCGTCTTT
CCGGCCCAGG AAGCTCTCGA CGCGGCCACC GTGAACGGGG CGCGCATGTA CGGCCTGGAT
GCGGGGTGCA TTGCCTCGGG CAAGCTCGCG GATTGCATTC TGGTCGATCT GGAGCATGTG
CGCATGGTCC CGAACCATCA CCTTGTGTCC AACCTGGTCT ACAGCGCGAA CAGCTCCTGC
GTGGACACGA CCATCTGCGA CGGCCGGGTG CTCATGCTCG GCGGCAAGGT CGAAGGCGAG
GAAGAGATCC TGGCCCAGGT CCGCGCGACA TTGGCCCGTC TGAATGCTCC GCGTGAGCCT
GAGGGGGACG CATGCTCCTG A
|
|---|
| Protein sequence | MSILIKKVRL NGELVDVLIK GNRFDSIGTD VDSSADVVID GSGKAILPSF HNAHTHAAMT
LLRGYADDMD LHTWLADHIW PFEARLTEDD IYWGAKLACL EMIKSGTTFF ADMYWHWKGT
ARAVTDMGMR AALSAAFFDF DDPVRAETMK RQVMDLHAAS VAFPDRIQFI LGPHAIYTVS
SDSLRWLGEY ANRHGLLVHL HLSETQKEVE DCLAKHGKRP VEYLHELGLL APNLILAHAV
WMTGKEMELL AGHGVQVVHC PVSNMKLCSG QFDYAAMQAH GVTVALGTDG CSSNNNLDMI
EEMKIASLLA KVTSMDPTVF PAQEALDAAT VNGARMYGLD AGCIASGKLA DCILVDLEHV
RMVPNHHLVS NLVYSANSSC VDTTICDGRV LMLGGKVEGE EEILAQVRAT LARLNAPREP
EGDACS
|
|---|
| |