Gene Dbac_0006 details

Gene Information

• Locus tag: Dbac_0006
• ID: 8375637
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfomicrobium baculatum DSM 4028
• Kingdom: Bacteria
• Replicon accession: NC_013173
• Strand: +
• Start bp: 8923
• End bp: 16281
• Gene Length: 7359 bp
• Protein Length: 2452 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 644999234
• Product: von Willebrand factor type A
• Protein accession: YP_003156552
• Protein GI: 256827824
• TIGRFAM ID: [TIGR03661] type 1 secretion C-terminal target domain (VC_A0849 subclass)

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTGCTA CAACACAAGA ATCCAGGCAG ACGCTCAGGT CCCCCGAGGC CGGGCAGTCC 
GTAGTCGTCA CCGCGATAGC GGGACAAGAC ATCGTGCTCG ACTCCGCCTT TGATCAGGCC 
GAGCCGAAAG TGTATGACAA CAGTGTTGTC TTCGAGTTTG CAAATGGCGG GCAGGTGGTC 
ATCGAGTTCA GTGATCTCCC GGATGGCCAG GTCCCGAACA TCATTTTGGC GGACGGCACG 
GTCCTCAATG TTCAGGAATT CCTAGCTTCC CTGGGTGAGG GAGATGTGGA GCCCGCAGCG 
GGCCCTGAAG GCGGCGCCAC CGGAAGCGGC GGTGTCGGCG AGTACAGGGA CGACGCGGGC 
AATCTTATCG ATGGCGTGGA CAAGCTGGGC GGCTTGGATC CGCGTGATTT CACCGCAATT 
ACGGTGGAGG CCCTTGAGGC CGATGCCGAT GTCGATGTCG AAGACGTCAA TCCTCTGCCT 
TCGGCAGGAC CGGCCTTCGG AGCCGCTGAC GAAGACGGAC TCCGCATCAG CGAACTGACC 
ATGACCCCCT TTGACGGCAA CGACGATGAA AGGGACGGCG ATCATCCTGC CCAATTTGCG 
TATGCCGAAG GAACCCTCAA TTATGATTTC GGAGGAGACG GCCCTTCCGC CACGAATCCG 
TTCGTGTGGA GCCTGGGCGG CCTTGAGGCG CTAGGTGTGG AATCACGCGG GCATGCCCTT 
CAGTATGAAG TCGTGGATGG CGGTACAACG CTGAACGCTT TTTATATCCT GGGGGAATAT 
CCGTCCGAAG GAGAATACGA TTCCAGCGTT GAATTCCAGG AATCCTTCAG GGTGGATGTA 
TTCAGTCTGA ACGTTACGGA CCTGGCTGCC GGAACGTACA GATTCGAGCT TTATCAGCCC 
CTTGATCACT CCGTGTCCGG CACGGAAGAT GACATCATCT ACAATTTTTC CTTCACTCTG 
ACCGATGGTT CCGGAGATTT CGTCGTAGGG GGCCTGAACA TGATCGTCGA TGACGATTCC 
CCTGTGGTCA CGGCGAATGC CTCCGGCCTG CCTGAATTGA TTCTCGACGA ATCTCCTGTA 
GGCGAAGGCG ATGGCTCCGG AATTGCCCAG AGCCCTCAGG AGACGTCCAA TTTCAGCATC 
GCAACGGCCA TCAGCCTGGA CGGATATTTC GCGCTGGGCG TCAATCCTGA TGTCGAAAAT 
TCTGAAACCG TGCCCTTTGT ATCCATCAAT GCCGTCGGCA ACGGCCAGCC GGATTATTAC 
GCGTTCACGG TAACTGAAGC CGGCTCGACC GCTGTGTTCG ATATTGATTA CGGGGGGAAT 
CACGGTGGCA GTTTTGATCC GTATATCCAC TTATGGGATT CGGCGGGAGT CCGCATTGCG 
TCTGACGATG ACCAGGGTGG TGATCCGGGA AGTTACAGTG GTCTTGACTC CTATCTGACG 
TATACATTCA CGGCGCCCGG CACCTACTAC ATTTCGGTGG GACAGTTTCC AGGAGGCAGT 
ACTCCGGATA ACCCGATTCC GGTTGGTGGA ACGTACCAGC TCCAGGTTTC CTTGCCCAAC 
GCCATTACGG GAGAAGGGCA TGGGGACGGA ATACGCGTGT TGTCCGCCGA TTTCTCCGGC 
AATTTTGACT TTGCCTACGG AGCTGACGGC CCCGGCATTA TAGACAGCGT CGGTTATGAG 
TTGTCGCTTA GCGAAGAAAG CGTGTCTTCC GGGCTGTTCG CTCTGGGTGA AAACGGCGAG 
CCGGGCGCGG AGATCATGCT CGGGATGGAA GTGGACGGCT CCATCATCGG CACAGTTGAT 
GGCGGAACTC CTTTCTTCCG CATCAGTGTG GATGGGGCGA GCGGAAGAGT CACTTTCGTG 
CAGTATGAAA ACGTATGGCA TGCCGCAGAT GATGATCATG ACGATTCCGT TTTCCTGGAT 
CTTCCGGAAG GAACGATTCT CTTGACCGCC GTCGCAACAG ATGGTGACGG GGATACGACC 
TCCGCATTTC TCGATTTGAG CACAGGCGTG TTTGGTATCG AGGATGACGG ACCGACTCTC 
AATGTCGAGG CTGATGGCCA GGCAGCGGGC GGTTTGGCGT TGAACCTTGA TGAGACCGTG 
GGTGATGATC GCGGGGCGGA TGCCGACGGC AACACTGATG ACGACGGCCC TGGGCTGGCT 
CGGGTCGTGA CGTCTCTTGA AGGAGGTTTG ACGGCGCTCT TTAATCTCGG AGGCGGCTAC 
GGAACCGACG GAGCCGGCAC GACCACGGGC TCTTTGAGCT TCGTGGGCTT TCCGACCACA 
GGAGGGCTGG AGACAACCCT GTCCTCGACT GCCGGCGGAA TGATCACGCT GTTCCTTGAG 
AGCGGCGCGA TTGTCGGACG TGACGCCGAT GGCGGCGACC CGGTGCTGAC GATCGAGATC 
GTGGAATCCC CTGCGGATTC CGGGCTTTAC CAGCTGCAAA CCACGCTTTA CGAGGCGCTG 
GATCACGGCG ATGACGGCAA TGAGTTCGAC TCCGCTCTGG ACCTGCTCCT TGCTGACGAA 
GGCGCCATCA AGCTGCAGTA CGAGGTGACC CGCACCGACG CCGACGGCGA CAGCGTGACC 
GAAAGCGCGG CGGTGAACCT GATCGATGAC GCCACTTCCG TTTTCAGCTT TGACGACGAC 
GGCCCGACCC TGACGGTGGT GGCCGAGGTT TCGGAACAGG AAGGGGCGCA GCTTGCGATG 
AATCTTGACG AGACCGTGGG TGATGATCGT GGGGCGGATG CCGACGGAAA CGATGACGAT 
GCAAGTCCTG CCCTTGCACA GGTGACGAGC AGTGTGAGCG GAGGCCTGAC GAGCCTGTTT 
GCCGCCCTCG GCGGCGACTA CGGTTCCGAC GGAGCCGGCA CGACCACGGG CTCTTTGAGC 
TTCGTGGGCT TTCCGACCAC AGGAGGGCTG GAGACAACCC TGTCCTCGAC TGCCGGCGGA 
ATGATCACGC TGTTCCTTGA GAGCGGCGCG ATTGTCGGAC GTGACGCCGA TGGCGGCGAC 
CCGGTGCTGA CGATCGAGAT CGTGGAATCC CCTGCGGATT CCGGGCTTTA CCAGCTGCAA 
ACCACGCTTT ACGAGGCGCT GGATCACGGC GATGACGGCA ATGAGTTCGA CTCCGCTCTG 
GACCTGCTCC TTGCTGACGA AGGCGCCATC AAGCTGCAGT ACGAGGTGAC CCGCACCGAC 
GCCGACGGCG ACAGCGTGAC CGAAAGCGCG GCGGTGAACC TGATCGATGA CGCCACTTCC 
GTTTTCAGCT TTGACGACGA CGGCCCGACC CTGACGGTGG TGGCCGAGGT TTCGGAACAG 
GAAGGGGCGC AGCTTGCGAT GAATCTTGAC GAGACCGTGG GTGATGATCG TGGGGCGGAT 
GCCGACGGAA ACGATGACGA TGCAAGTCCT GCCCTTGCAC AGGTGACGAG CAGTGTGAGC 
GGAGGCCTGA CGAGCCTGTT TGCCGCCCTC GGCGGCGACT ACGGTTCCGA CGGAGCCGGC 
ACGACCACGG GCTCTTTGAG CTTCGTTGGC TTTCCGACCA CAGGGGGGCT GGAGACAACC 
CTGTCCTCGA CTGCCGGCGG AATGATCACG CTGTTCCTTG AGAGCGGCGC GATTGTCGGA 
CGTGACGCCG ATGGCGGCGA CCCGGTGCTG ACGATCGAGA TCGTGGAATC CCCTGCGGAT 
TCCGGGCTTT ACCAGCTGCA AACCACGCTT TACGAGGCGC TGGATCACGG CGATGACGGC 
AATGAGTTCG ACTCCGCTCT TGACCTGCTC CTTGCGGACG AAGGCGCCAT CAAGCTGCAG 
TACGAGGTGA CCCGCACTGA CGCCGACGGC GACAGCGTGA CCGAAAGCGC GGCGGTGAAC 
CTGATCGATG ACGCCACTTC CGTTTTCAGC TTTGACGACG ACGGCCCGAC CCTGACGGTG 
GTGGCCGAGG TTTCGGAACA GGAAGGGGCG CAGCTTGCGA TGAATCTTGA CGAGACCGTG 
GGTGATGATC GTGGGGCGGA TGCCGACGGA AACGATGACG ATGCAAGTCC TGCCCTTGCA 
CAGGTGACGA GCAGTGTGAG CGGAGGCCTG ACGAGCCTGT TTGCCGCCCT CGGCGGCGAC 
TACGGTTCCG ACGGAGCCGG CACGACCACG GGCTCTTTGA GCTTCGTTGG CTTTCCGACC 
ACAGGAGGGC TGGAGACAAC CCTGTCCTCG ACTGCCGGCG GAATGATCAC GCTGTTCCTT 
GAGAGCGGCG CGATTGTCGG ACGTGACGCC GATGGCGGCG ACCCGGTGCT GACGATCGAG 
ATCGTGGAAT CCCCTGCGGA TTCCGGGCTT TACCAGCTGC AAACCACGCT TTACGAGGCG 
CTGGATCACG GCGATGACGG CAATGAGTTC GACTCCGCTC TGGACCTGCT CCTTGCGGAC 
GAAGGCGCCA TCAAGCTGCA GTACGAGGTG ACCCGCACCG ACGCCGACGG CGACAGCGTG 
ACCGAAAGCG CGGCGGTGAA CCTGATCGAC GATGCCGCCT CCTTCTTCAG CTTTGACGAT 
GACGGCCCGA GCATGGTTGT GGGTGCGATC GCCGAAAGCG GGCTGACGCT GACAACGGAC 
GACGCACAGA CCATTGGTGC TGATTTCGAT ACGGACAGCG TTAATTTTGC CGCGGCCATA 
CAGTCTGCGG TGACTCCGCT TTACGGTTCG GATGGCTCCG GCGGGACGGT GATCAGCGGT 
TTCGAATTGG CCATCAGTGG CGGTGGCGAA TTGGATTCCG GGCTGAACAG CAACGGACTT 
GATATCATCC TGTCCAAGGA CGGTGATGAC GTAGTAGGAC GAACCACTGC GGGCGAAGTC 
TTTCGGATCT CCGTGGATTC GACCGGAACA GTGGTCTTGA AGCAGTCGGC CGAAGTCGAC 
CATATCGAAG GTACGCCCAA TGATGATCTG ATCAGCCTGG CGGATTCCAA GGTTTTCCTT 
GAAGCCACGG CGACCGTCAC CGATGGAGAC AACGACGTGG CGACCAGGAC GCTCAGCGTG 
GATCTGGGCG GGAATATTCG CTTTGTCGAC GATGTCCCGA GCGCTGAAAA CGACTCCGTT 
TCCGCAGCTG AAAACTGGAC CGGGGCCAAG ACCTACAACC TGATGCTTAT CGTCGACAGG 
TCGGGCAGCA TCAACCAGAC CGAGATGCAG GCCGCCGTGG TGGCCATGAA CAGCCTCCTC 
GACAAGTATG CCGAAGTGGC CCTGGGCGGC GAGGCCGGAG TCCAGGTCCA GGTGGTCACG 
TTCGCGGTGG ATGGAACATT GGTGCATGGC TCGCCGGTTT CAATCGCGGA AGCCAAGGCA 
TATCTGGACA TCCTCGACAA TAGCGGCGGC AGCGGCAACA CCAACTACGA CGCGGCGGTG 
GCGGCCGCGA CTCCCGCCAT AGACGGCTGG CCAGTGGCAA CAGCAGATCA TGACAACGTG 
GTCTACTTCA TCTCCGATGG CGCTCCCACA GTCGGCAATG GCACTGTCGG TCTGACCAAT 
GCGGAAGAAG CCGCCTGGGA AACAACGCTG GAGAGCCGTG GAGCAACATC CTGGGCTATC 
GGCGTCGGCA CCAGCAACGC CGTTGACGAT GATCTGGCCG ACGTGGCCTA CCCGGATGGA 
AACGTCCTGT TGGCCAGCAA CTTCAACGAC TCGCTGCTTG ACGCCTTGAT CGGCACCGTG 
CCGGTCCCGA CAACAGTCAG CGGCAACGTC CTGGACAACG ACGCTTCGGG CGCGGATGGC 
TGGAATTCCC CGGCTCTGGT TTCGGCCAGT TTCGGCACAG ACACACATGT CTTCTCTTCG 
CCCACTGATT CCCACACCTT TGACCTGGGT CTTGTCGGCT CGGTGCTCCT CAGGGGTGAT 
GGAAGCTACA TCTTCACGCC CGCCGAGGAC GTGCAGGACG ACATCTTCGC CGACCTTCTC 
TATACGGTTC GCGATGGTGA CGGCGACGAG ACTGGGGCAA CCTTACGGCT GACCACCACG 
GATCTGAGCG AAGTCACGGC GGTCGGCGAC ACGGTCACCG TCATCCCCAG CATTCCCTGG 
GATGGCAATA GCGCCTTTAC GGATAACGGC TCCGGAGTGC AGGAAGTCTA TGACATCCAG 
TCAGTGCCTT TCGAAGTTGA TGCCGGAGAC TCGATCTATC TGACTCTTGA AGTGTCCGAG 
TTCATCAATC CTCCAAATTC GGGAGGTCAG GGTACGGACA GGATAAAGGT CGATATACTC 
GACGAGTTTA ACACCGTCCG GGCGTCAGTG GTTCTTGAGT ACGAGAATAA TGCCTGGACC 
GCGACGGGTG ATGGTGTGAT AGGTTCCTCG TCGCTTTCCG GAGGCATCGC GACTCTCAAT 
CTCGTAATCG ACGGCGTGCC TGCCGGTGCC AATTTGAGGG TGGCCATAGA TGTCAACAAC 
CGGACCCCCG GCAATGAGAA GCTGACGGTA CAGGCCACCA CGCTTGTGGT CGGCGAAGGG 
GCCGAGTCCT CGTTCTGGCC GAGCGTCGGC ACGGCTGCCA TGGCTGTGCC CATAACCGGG 
GATCTCTTCG CCAACGACGC CCTCGGCGCT GAAGGTGCAA GCATCATGGC CGTGGCAGTG 
GGCGGTCTGG TCTTCACCGA CGACAACAGC GACGGTCTCA TCGTTGCCAC CGGCTCCTAT 
GGAGTGGTTA CGGTCAACAC CCTGACCGGC GCTTTCGAGT ACGCGCCCAA TACGACGGGG 
TCGGTGCCGG ATCTCGGGGA TTCCGATGTG TTCACCTACA CGGTGGCGCA GGCTGACGGA 
GATTCGTCCA TGGCCGATCT GACCATCAAC TTCGCGGGCG CCGTCGGACA GACCGGCACC 
GGAAACTCCG AGACACTGGT GCTGTCTGTG GACACAGGCG GTTCCATGAG CGGCCTTGGC 
GGAAACGACC ATCTGATCGG CGGCGAAGGT GACGACAGCC TCTATGGTGG CGACGGCTCC 
GATGTTCTTG AAGGCGGCCT GGGTAACGAT TACCTCGGTG GCGGCGCGGG CAGCGACTTC 
CTGTCCGGCG GCGCGGGCAG CGATACCCTG GTGGGCGGTG CAGGTGATGA CGTCATGACC 
GGCGGCGCCG GGCAGGATGT CTTCCGGTAC ATGGCCGGCG ATCTGGCAAA CGCCATTGAC 
GGCGACACCA TCACCGACTT CGAGTTGGGC GCAGGCGGAG ACAGCCTCGA TCTGCAGGCC 
TTGCTCACCG GCGCGACTGC GGGCACCCTC GATCAGTACC TCGACTTCAC GGTGACGAAT 
ATCGCCGGAG GGGAGGCCAC GGTCGAGATC AACGTGGATC CCGCCGGAAC GGGCAATCAT 
GCCACCACTC TGGCGACCAT CACGGTCACC GGTGTGGGGG CAGGGGATAC CGCCGACAGC 
ATCATAGATA CGATGATAAA TCACAACATA GACATCTAA 

 

Protein sequence

MAATTQESRQ TLRSPEAGQS VVVTAIAGQD IVLDSAFDQA EPKVYDNSVV FEFANGGQVV 
IEFSDLPDGQ VPNIILADGT VLNVQEFLAS LGEGDVEPAA GPEGGATGSG GVGEYRDDAG 
NLIDGVDKLG GLDPRDFTAI TVEALEADAD VDVEDVNPLP SAGPAFGAAD EDGLRISELT 
MTPFDGNDDE RDGDHPAQFA YAEGTLNYDF GGDGPSATNP FVWSLGGLEA LGVESRGHAL 
QYEVVDGGTT LNAFYILGEY PSEGEYDSSV EFQESFRVDV FSLNVTDLAA GTYRFELYQP 
LDHSVSGTED DIIYNFSFTL TDGSGDFVVG GLNMIVDDDS PVVTANASGL PELILDESPV 
GEGDGSGIAQ SPQETSNFSI ATAISLDGYF ALGVNPDVEN SETVPFVSIN AVGNGQPDYY 
AFTVTEAGST AVFDIDYGGN HGGSFDPYIH LWDSAGVRIA SDDDQGGDPG SYSGLDSYLT 
YTFTAPGTYY ISVGQFPGGS TPDNPIPVGG TYQLQVSLPN AITGEGHGDG IRVLSADFSG 
NFDFAYGADG PGIIDSVGYE LSLSEESVSS GLFALGENGE PGAEIMLGME VDGSIIGTVD 
GGTPFFRISV DGASGRVTFV QYENVWHAAD DDHDDSVFLD LPEGTILLTA VATDGDGDTT 
SAFLDLSTGV FGIEDDGPTL NVEADGQAAG GLALNLDETV GDDRGADADG NTDDDGPGLA 
RVVTSLEGGL TALFNLGGGY GTDGAGTTTG SLSFVGFPTT GGLETTLSST AGGMITLFLE 
SGAIVGRDAD GGDPVLTIEI VESPADSGLY QLQTTLYEAL DHGDDGNEFD SALDLLLADE 
GAIKLQYEVT RTDADGDSVT ESAAVNLIDD ATSVFSFDDD GPTLTVVAEV SEQEGAQLAM 
NLDETVGDDR GADADGNDDD ASPALAQVTS SVSGGLTSLF AALGGDYGSD GAGTTTGSLS 
FVGFPTTGGL ETTLSSTAGG MITLFLESGA IVGRDADGGD PVLTIEIVES PADSGLYQLQ 
TTLYEALDHG DDGNEFDSAL DLLLADEGAI KLQYEVTRTD ADGDSVTESA AVNLIDDATS 
VFSFDDDGPT LTVVAEVSEQ EGAQLAMNLD ETVGDDRGAD ADGNDDDASP ALAQVTSSVS 
GGLTSLFAAL GGDYGSDGAG TTTGSLSFVG FPTTGGLETT LSSTAGGMIT LFLESGAIVG 
RDADGGDPVL TIEIVESPAD SGLYQLQTTL YEALDHGDDG NEFDSALDLL LADEGAIKLQ 
YEVTRTDADG DSVTESAAVN LIDDATSVFS FDDDGPTLTV VAEVSEQEGA QLAMNLDETV 
GDDRGADADG NDDDASPALA QVTSSVSGGL TSLFAALGGD YGSDGAGTTT GSLSFVGFPT 
TGGLETTLSS TAGGMITLFL ESGAIVGRDA DGGDPVLTIE IVESPADSGL YQLQTTLYEA 
LDHGDDGNEF DSALDLLLAD EGAIKLQYEV TRTDADGDSV TESAAVNLID DAASFFSFDD 
DGPSMVVGAI AESGLTLTTD DAQTIGADFD TDSVNFAAAI QSAVTPLYGS DGSGGTVISG 
FELAISGGGE LDSGLNSNGL DIILSKDGDD VVGRTTAGEV FRISVDSTGT VVLKQSAEVD 
HIEGTPNDDL ISLADSKVFL EATATVTDGD NDVATRTLSV DLGGNIRFVD DVPSAENDSV 
SAAENWTGAK TYNLMLIVDR SGSINQTEMQ AAVVAMNSLL DKYAEVALGG EAGVQVQVVT 
FAVDGTLVHG SPVSIAEAKA YLDILDNSGG SGNTNYDAAV AAATPAIDGW PVATADHDNV 
VYFISDGAPT VGNGTVGLTN AEEAAWETTL ESRGATSWAI GVGTSNAVDD DLADVAYPDG 
NVLLASNFND SLLDALIGTV PVPTTVSGNV LDNDASGADG WNSPALVSAS FGTDTHVFSS 
PTDSHTFDLG LVGSVLLRGD GSYIFTPAED VQDDIFADLL YTVRDGDGDE TGATLRLTTT 
DLSEVTAVGD TVTVIPSIPW DGNSAFTDNG SGVQEVYDIQ SVPFEVDAGD SIYLTLEVSE 
FINPPNSGGQ GTDRIKVDIL DEFNTVRASV VLEYENNAWT ATGDGVIGSS SLSGGIATLN 
LVIDGVPAGA NLRVAIDVNN RTPGNEKLTV QATTLVVGEG AESSFWPSVG TAAMAVPITG 
DLFANDALGA EGASIMAVAV GGLVFTDDNS DGLIVATGSY GVVTVNTLTG AFEYAPNTTG 
SVPDLGDSDV FTYTVAQADG DSSMADLTIN FAGAVGQTGT GNSETLVLSV DTGGSMSGLG 
GNDHLIGGEG DDSLYGGDGS DVLEGGLGND YLGGGAGSDF LSGGAGSDTL VGGAGDDVMT 
GGAGQDVFRY MAGDLANAID GDTITDFELG AGGDSLDLQA LLTGATAGTL DQYLDFTVTN 
IAGGEATVEI NVDPAGTGNH ATTLATITVT GVGAGDTADS IIDTMINHNI DI