Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daud_2187 |
Symbol | |
ID | 6027184 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Desulforudis audaxviator MP104C |
Kingdom | Bacteria |
Replicon accession | NC_010424 |
Strand | - |
Start bp | 2301166 |
End bp | 2301846 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641595005 |
Product | deoxyribonuclease V |
Protein accession | YP_001718306 |
Protein GI | 169832324 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1515] Deoxyinosine 3'endonuclease (endonuclease V) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGATGC ACTCCCTGCA CCCCTGGACC ATAGAGCCGG CCGGGGCGCG GGAACTCCAG CGGGAGCTGG CCGGACGACT CCGGTTCCAG TTCCCGCCGG GGTTGCGGGT CAGGCACGTG TGCGGCGTCG ATGTGTCTTC CGCCCGCACG GATAACCGGC TTTACGCGGC CGCCGTGGTG TTCTCCTTTC CGGAACTCGA ACTGGTGGAA GCGGCCACCG CCGTTCTGCC GGCTGCCTTT CCGTACGTGC CGGGTCTGCT GTCCTTCCGG GAAGGCCCGG TCCTGCTGGA GGCCCTGCAA CACTTGCGTG TCACTCCCGA CGTGGTGCTG TGCGACGGGC AGGGCACGGC CCATCCTCGG GGTGTGGGGA TCGCGAGTCA TCTCGGACTC TTCCTGGACC GGCCCACCCT GGGGGTGGCG AAGACAGTCC TGGTGGGCGA TTACAATCCC CCGGGGCCCG AGCCTGGGGC CGTCTCGCCC CTGGTCCACC AGGGCCGCGT CGTCGGTACC GTCCTCAGAA CCAAGCGCGG AGTGAAACCG GTGTTCATCT CCCCCGGGCA CCTTGTCGAT CCGGATACCG CCGTCGAACT GGCGCTGGCC TGCTGCCAGG GTTACCGCCT ACCGGAACCG GTGCGCCAGG CGCACCTTCT GTCTAACCGG CTGCGCCGGG TCAAAGCTTA G
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Protein sequence | MKMHSLHPWT IEPAGARELQ RELAGRLRFQ FPPGLRVRHV CGVDVSSART DNRLYAAAVV FSFPELELVE AATAVLPAAF PYVPGLLSFR EGPVLLEALQ HLRVTPDVVL CDGQGTAHPR GVGIASHLGL FLDRPTLGVA KTVLVGDYNP PGPEPGAVSP LVHQGRVVGT VLRTKRGVKP VFISPGHLVD PDTAVELALA CCQGYRLPEP VRQAHLLSNR LRRVKA
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