Gene Daud_2154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_2154 
Symbol 
ID6025403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand- 
Start bp2269238 
End bp2270305 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content64% 
IMG OID641594972 
Productpeptide chain release factor 1 
Protein accessionYP_001718273 
Protein GI169832291 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0216] Protein chain release factor A 
TIGRFAM ID[TIGR00019] peptide chain release factor 1 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.000000509235 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCGCGA AATTGGACCA TCTGGAAGCG AAATACGAGG AACTCAATAG ACTGATTTCC 
GACCCGGTGG TGATTCAGGA CCAGGAGCGT TGGCGGGGCT ATGTGAAGAG CCATGCTGAA 
ATCGGCGAAG TGGTCGCCGT CTACCGGGAA TATAAGCGGG TGGCCGCCGA GATGGATGAT 
GCGCGGCAGA TGCTCCGGGA GGAGCAGGAC GCCGAGTTGC GCGAGTTGGC CGAGAGCGAG 
GTCGAGGTGC TGCGGGAGCG GTCCGACGAA TTGAGGCGGC GCCTGCGCGT CCTTTTGCTG 
CCGAAGGACC CGAACGACGA GAAGAACGTA ATCATCGAGA TCCGGGCCGG CACCGGCGGG 
GAGGAGGCCG CCCTTTTCGC GGGGGACCTC CTGCGGATGT ACCTGCGCTA CGCCGAGCGC 
CGGGGCTGGC GGGCCGAAAT GCTGAACGTG AACGAGACCG ACCTCGGGGG GATCAAGGAA 
GCGATCGTCC TGCTTGAGGG CCGGGGGGCG TACAGCGAGT TGAAATTCGA GAGCGGCGTC 
CACCGGGTGC AGCGGGTGCC GGCCACCGAA TCGGGCGGGC GGATTCACAC CTCGGCGGCC 
ACTGTCGCCG TACTGCCGGA GGCCGAGGAA GTGGACGTGG AGATCCGGCC GGAGGATCTG 
CGGATCGACG TGTTTTGCTC CACCGGCCCC GGGGGCCAGT CGGTGAACAC CACCCAGTCG 
GCGGTGCGGG TCACCCACCT GCCGAGCGGG ATCGTGGTCA GCTGCCAGGA CGAGAAGTCG 
CAGCACAAAA ACCGGGACAA GGCGATGAAA GTGCTCCGGG CGCGGCTTCT CGACAAAGCC 
CAGCAGGAAC AGCAGGAGCG GATCGCTTCG AGCCGGAAGA CCCAGGTCGG CACGGGCGAT 
AGGAGCGAGC GGATCCGGAC CTACAACTTT CCCCAGAACC GGGTGACCGA CCACCGCCTG 
AACCTGACCC TCTACCGCCT GGAAGAAGTG CTGCAAGGCG ACCTGCACGA GTTCGTCAGC 
GCCCTGATCA CCAGCGACCA GGCCGAAAAA CTCAAAACCC TCGACTAA
 
Protein sequence
MFAKLDHLEA KYEELNRLIS DPVVIQDQER WRGYVKSHAE IGEVVAVYRE YKRVAAEMDD 
ARQMLREEQD AELRELAESE VEVLRERSDE LRRRLRVLLL PKDPNDEKNV IIEIRAGTGG 
EEAALFAGDL LRMYLRYAER RGWRAEMLNV NETDLGGIKE AIVLLEGRGA YSELKFESGV 
HRVQRVPATE SGGRIHTSAA TVAVLPEAEE VDVEIRPEDL RIDVFCSTGP GGQSVNTTQS 
AVRVTHLPSG IVVSCQDEKS QHKNRDKAMK VLRARLLDKA QQEQQERIAS SRKTQVGTGD 
RSERIRTYNF PQNRVTDHRL NLTLYRLEEV LQGDLHEFVS ALITSDQAEK LKTLD