Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daud_2046 |
Symbol | |
ID | 6025959 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Desulforudis audaxviator MP104C |
Kingdom | Bacteria |
Replicon accession | NC_010424 |
Strand | - |
Start bp | 2156589 |
End bp | 2157494 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641594867 |
Product | cytidine deaminase |
Protein accession | YP_001718168 |
Protein GI | 169832186 |
COG category | [F] Nucleotide transport and metabolism [R] General function prediction only |
COG ID | [COG0295] Cytidine deaminase [COG0319] Predicted metal-dependent hydrolase |
TIGRFAM ID | [TIGR00043] metalloprotein, YbeY/UPF0054 family [TIGR01354] cytidine deaminase, homotetrameric |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGTCG TAATAAACAA CTTACAGGAC ACAGTTCCGG TTGACGAGCA CCTGATGGCC CTGATCACCA GAGCCGTGGA GTCGGCACTG GCCGGGGGGG ACAGGCGGCG GGTCGAAGTG AGTGTCGCCC TGGTGGATGA TGAATACATT CACGACCTGA ACCGGCGGTT CCGGGGGCAG GATCGCCCCA CCGACGTGTT ATCCTTCCCA ATGGGCGAAG AGGAACCCGG TGCCGGAGAT GAGCCGGGTG TGCTGCTCCT GGGCGACGTG GTGATCTCCC TGCCGGCGGC GGCGCGTCAG GCTGCCGAAT ACGGTCACGG GCTGGACCGG GAGGTCGCCC GGTTGGCCGT GCACGGTACC CTCCACCTCC TGGGCTATGA CCATGAACAG GATGAGGACG CGAGCCGGAT GCAGGAACGC GAAGACGCCG TTCTCGCCGT GCTGGGAAAA AGGGGAACAG TCCCCTGGGA AAAGGGGGAC AGTCCTCCTT TTTCCGCCGA TACCGAACTT GTCGAACGGG CCCTGGCGGC CCGTCAAAAC GCCTATGCGC CCTACTCCGG ATTCCGGGTG GGGGCGGCGC TCCAGGTCCG GGGTGACCGG GTGTTCACCG GGTGCAACGT GGAAAACGCT TCGTACGGCC TCACGGTCTG TGCCGAGCGG GTGGCCGTGG TTTCGGCCGT GGCCGCCGGG GCCCGGGAAT TCACGGCCCT GGCGGTGGCC GGGGACGGAG AAGACCCCGC TCTTCCCTGC GGCGCCTGCC TCCAGGTGTT GAGTGAGTTC GCGCCGCACC TCCGCCTGCT TCTGGCCAAC GCCCGCGGCG AGTTCGCAGT GCGGACCCTC CCCGAACTCC TGCCGAAAGC GTTCCAACTC CACCGCCGGG GTGACACCCC GCAGCCGACA TCATGA
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Protein sequence | MTVVINNLQD TVPVDEHLMA LITRAVESAL AGGDRRRVEV SVALVDDEYI HDLNRRFRGQ DRPTDVLSFP MGEEEPGAGD EPGVLLLGDV VISLPAAARQ AAEYGHGLDR EVARLAVHGT LHLLGYDHEQ DEDASRMQER EDAVLAVLGK RGTVPWEKGD SPPFSADTEL VERALAARQN AYAPYSGFRV GAALQVRGDR VFTGCNVENA SYGLTVCAER VAVVSAVAAG AREFTALAVA GDGEDPALPC GACLQVLSEF APHLRLLLAN ARGEFAVRTL PELLPKAFQL HRRGDTPQPT S
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