| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_2019 |
|---|
| Symbol | |
|---|
| ID | 6025895 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | - |
|---|
| Start bp | 2124009 |
|---|
| End bp | 2125067 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641594841 |
|---|
| Product | thiamine-phosphate pyrophosphorylase |
|---|
| Protein accession | YP_001718142 |
|---|
| Protein GI | 169832160 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0352] Thiamine monophosphate synthase |
|---|
| TIGRFAM ID | [TIGR00693] thiamine-phosphate pyrophosphorylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCGGGAAA TCTGCCGGAT CGCCGACGTG AACTTTAACC GGGCCAGGGA GGGCCTCCGG
GTGGTGGAGG AAGCCTGCCG TTTCGTATTG GCGGACCCCG GGTTGACCGC GAGAATCAAG
GAACTGCGGC ATCGGCTCTC AGTCCTGGAA GAAGCCTTTC CCGGCGGCCG CCTGGCGCTG
CTCGCGGCGC GGGACATTTC GGGGGATGTC GGGGCGCCGG CCCCGGAGAA CCGTCCCCGT
GATAATATCT TTGCCGCCGC CGGGGCCGGC TGGAAGCGGG CGCAGGAGGC CGCCCGGGTG
CTGGAGGAAC TGTCCCGGGA AGCGGACCCG GCACCGGCCC GACACTTCAA GGAGTTCCGG
TTCGCCCTCT ATGCGGCCGA GCGGGAGTGG ACCCTCACTT CCGCCGCTTG GGGGCGTAAA
GCCGCCTTTG ACCGGGTCCG GCTCTACCTG GTGGCTGGGC GCGCGGACAC CGGGGGGCGG
CCTCTGGTGG AGGTGGTGCG GGCGGCCGTG GCCGGCGGAG CGGGAGCCTT CCAGCTGCGG
GAAAAAAACA TGGAAACCCG GGAGCTGACG GCGCTGGCCG CCGAACTGTG CGCGGTGGTC
CGGTCAGCGG GGGCGCTCTT TCTGGTCAAC GACCGGGTGG ACGTAGCCGC GGCGGTCGAC
GCCGACGGGG TGCACCTGGG GCAGGACGAC CTGCCGGTGG AGGCCGCGCG TCGCTTGCTC
GGCCTTGGAA AGCTGATCGG GGTTTCCGTC CACAGCCCGG CGCAAGCCCG TGAGGCTTGG
GAGCAGGGCG CGGACTACGT CGGCCTCGGA GCGGTGTTTC CCACGGCAAC CAAGCCGGAG
GCCCGCGCCG TGAGCCTGTC CCGGCTGTCG GAGTTGGCCG CTGGAGTGGA CCTGCCCTCC
GTGGCCATCG GGGGCATAGA CCTGTCAAAC ATCAAAGAGG TGCTCCGGGC GGGGTTCCGG
AGGGTGGCAG TGGTGCGCGC GGTGGCGGGG GCGCCCGATC CGAATCTGGC TGCCGCCGCT
CTTTGCGAAG CGATTAATGA AGTATGGGGG GATCATTGA
|
|---|
| Protein sequence | MREICRIADV NFNRAREGLR VVEEACRFVL ADPGLTARIK ELRHRLSVLE EAFPGGRLAL
LAARDISGDV GAPAPENRPR DNIFAAAGAG WKRAQEAARV LEELSREADP APARHFKEFR
FALYAAEREW TLTSAAWGRK AAFDRVRLYL VAGRADTGGR PLVEVVRAAV AGGAGAFQLR
EKNMETRELT ALAAELCAVV RSAGALFLVN DRVDVAAAVD ADGVHLGQDD LPVEAARRLL
GLGKLIGVSV HSPAQAREAW EQGADYVGLG AVFPTATKPE ARAVSLSRLS ELAAGVDLPS
VAIGGIDLSN IKEVLRAGFR RVAVVRAVAG APDPNLAAAA LCEAINEVWG DH
|
|---|
| |