Gene Daud_1884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_1884 
Symbol 
ID6025882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp1985299 
End bp1986558 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content62% 
IMG OID641594702 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_001718009 
Protein GI169832027 
COG category[C] Energy production and conversion 
COG ID[COG1148] Heterodisulfide reductase, subunit A and related polyferredoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.254068 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAACA AAAGCATCCT GGTTGTCGGG GGAGGGATAA GTGGGCTGAC CACGGCCCTG 
GAAGCGGCGG AGGTGGGCTA CGAGGTCTAT CTCGTGGAGA AGAACCCCTA CCTGGGCGGC
CGGGTCGCTC AACTGCACCA GTACTTCCCC AAACTATGCC CGCCGAACTG CGGGTTGGAA
ATCAACTTCC GGCGCTTGCG CAAAAATCCC AGGATCAAGT TTTTCACCTG TGCCGAGGTC
GAGAAGATCT CCGGCCGAAA GGGAGACTTT GACGTCACCG TCAAGCTGAG CCCGCGTTAC
ATCAAGCCGG AGTGCACCGC GTGTGGCGAC TGCGTGGCGG TCTGCCCGGC GGAGCGGCCG
AATGATTTCA ACTACGGCCT GGACACCACC AAAGCGATCT ACCTGCCCCA CCCGTTCGCC
TTCCCCTTGA AGTACTTGAT CGACCGTCAA GCCTGTCCTG ATGGCTGTGC CAAGTGCGTC
GAGGCGTGCA AGTACAACGT GATCGATCTC ACCATGGCCC CGGAGACGGT GAACCTGAAG
GTAGGGGCGG TGGTGTACGC CACCGGTTGG AAGCCGTACG ATGCCGCCAA GATCAGCTAC
TACGGTTTCG GGCGCTTGAA GAACGTCATC ACCAACGTCA TGCTGGAGCG GTTGGCGGTA
CCCAACGGCC CGACCGAGGG CCGGATCGTC CGCCCGTCCG ACGGGAAGCA GCCGGAGACC
ATCGCCTTTG TGCAATGTGC CGGCTCGCGG GACGAGAATC ACCAGGCCTA CTGCTCGCAG
ATCTGCTGTC TGGCTACCTT GAAGCAGATC ACCTACATCC GGGAAAAGAA CCCCGACGCC
AAAATCTACG TTTTCTACAT CGACATCCGG GCGCTGGGCA AGTACGAGGA CTTTTACACC
AAGGTGGCCA AGGACGAAAA CGTGGTCTTC ATCAAGGGCA AGGTCGGTGA GATCACCGCG
GACCCGGCCA CCGGAGACCT GACCCTCGAG ACCGAGGATC AGGAGGCGGG CAAGACCGTC
ACCCAGAAAG TGAACCTGGT GGTGCTGGCG ACCGGCATGG CGCCGTCCAC TTTGGAAGCT
CCGGTCCCCT CGGAACTGGC CGCGGCCGAC GCGGGCGGTT TCGTGGTTTC CGACATAGCC
GAGACGGGCA TCGGCGGCGC CGGGTGCGCC CGGAAGCCGA TGGAGGTTTC GGCGTCCGTG
CGCGACGCCA CAGCGGCCGC GCTCAAAGCC ATTCAGGCTA CGGTGGGGGG TGGCAAGTAG
 
Protein sequence
MANKSILVVG GGISGLTTAL EAAEVGYEVY LVEKNPYLGG RVAQLHQYFP KLCPPNCGLE 
INFRRLRKNP RIKFFTCAEV EKISGRKGDF DVTVKLSPRY IKPECTACGD CVAVCPAERP
NDFNYGLDTT KAIYLPHPFA FPLKYLIDRQ ACPDGCAKCV EACKYNVIDL TMAPETVNLK
VGAVVYATGW KPYDAAKISY YGFGRLKNVI TNVMLERLAV PNGPTEGRIV RPSDGKQPET
IAFVQCAGSR DENHQAYCSQ ICCLATLKQI TYIREKNPDA KIYVFYIDIR ALGKYEDFYT
KVAKDENVVF IKGKVGEITA DPATGDLTLE TEDQEAGKTV TQKVNLVVLA TGMAPSTLEA
PVPSELAAAD AGGFVVSDIA ETGIGGAGCA RKPMEVSASV RDATAAALKA IQATVGGGK