Gene Daud_1827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_1827 
Symbol 
ID6027651 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp1930594 
End bp1931439 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content67% 
IMG OID641594643 
Productresponse regulator receiver protein 
Protein accessionYP_001717954 
Protein GI169831972 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID[TIGR02584] CRISPR-associated protein, NE0113 family
[TIGR03642] CRISPR-associated protein, Csx13 family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATCTGTA CCCTGGGAGT GGAACCCCAG GTGGTGACCA TTACTCTTGA CTGTCTCCTG 
GCTGAAGGCG CGCCGGTGGA TGAGGTAGTA GCCGTCCACA CCGAGGACGC CGGTGTCCGG
GAGGCCCTGG CGGTGCTGGA AGAGGAGTTC TCCGGTGTAA TCTACCCCAG CGTGACGCTG
CGGGCGGTTC CGGTGACCGT GCCCGGCGGC CCGGTCGCCG ATTTCCGGGG CGAGGATGAG
CTGCGCGGCC TCCTGCGCGC TCTTTACACC GAGGTCCGCC GGGCGCGGGA GCAAGGGCGG
GTTGTGCACC TGTGTGTGTC GGGCGGCCGC AAAGTCATGG GGATCATGGC GGTGGTTGTC
GCTCAGCTCC TTTTCGGCCC CGAGGACCGT GCCTGGCATC TGGTCACCGA GGGCTGGCGG
CCCGGCGCTG AGCGCCGCCT GCATCTGCCG CCGGGAGAGA AAGTGTGGCT CGTGCCGGTC
CCGGTACTGC GCTGGAGCGA AGCGGCTACG CTGATGCGTA CGGTGGCCGA GCTGGATGAT
CCGGCGGCGG TCGTGGAATG GTACGAGAAA CTGAGCCGCG AAGCCCGGGA ACGGCGGAAG
GGGGAGTTCA TCCGCCGCTG GCTGACCCCG GCCGAGCGGG AGGTAGTCCG CCTGGCCTGC
AAAGGCTTGG ATAACGCGGC CATCGCCAGA GCCCTCTTCA AGGGGGAGCA GACCGTGGCC
AACCAACTCG GCGCCGCCTA CGAGAAGCTG AGGGAGTGGC TTGAGTACCC TGAGGGCAAC
GTCGACCGCT CCCGGCTCAT CGCCGAGTTC GCGCCTTACT TTGTTTTCAC GGAGGAAGAG
GGATAA
 
Protein sequence
MICTLGVEPQ VVTITLDCLL AEGAPVDEVV AVHTEDAGVR EALAVLEEEF SGVIYPSVTL 
RAVPVTVPGG PVADFRGEDE LRGLLRALYT EVRRAREQGR VVHLCVSGGR KVMGIMAVVV
AQLLFGPEDR AWHLVTEGWR PGAERRLHLP PGEKVWLVPV PVLRWSEAAT LMRTVAELDD
PAAVVEWYEK LSREARERRK GEFIRRWLTP AEREVVRLAC KGLDNAAIAR ALFKGEQTVA
NQLGAAYEKL REWLEYPEGN VDRSRLIAEF APYFVFTEEE G