Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daud_1812 |
Symbol | |
ID | 6025766 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Desulforudis audaxviator MP104C |
Kingdom | Bacteria |
Replicon accession | NC_010424 |
Strand | - |
Start bp | 1915323 |
End bp | 1915859 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641594629 |
Product | CRISPR-associated Cas4 family protein |
Protein accession | YP_001717940 |
Protein GI | 169831958 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1468] RecB family exonuclease |
TIGRFAM ID | [TIGR00372] CRISPR-associated protein Cas4 |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.233304 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAATAG ATGCCAAATT CCAGGAAGCA GCGCCTTTCC ATTTGCAACC GGTTGTAGGT AGCATGGTTA ACGCCTATAT TATTTGCCCC AGGAAGGCCT GGCTTATGTC CCGGCAGATC TGCCCCGATG AGGACAATAC CTATCTCCAC CTGGGCCGGC TTATTCAGAA CCAGAGCTAT GGCCGCGAGC GCAAGGAGGT GCGCCTGGAA CACTTGTGCC TGGACCTTAT CCGCCGGGAG GAAGAAACCC TGGTGGTGGC GGAGGTGAAA AAATCCTCCC GGGCCCGGGA AGCCGCCAGG ATGCAGTTAG CTTTTTATCT TTATGAACTG GAGCAGATGG GAGTTGAAGC CGAGGGCGAA CTCCTTTTCC CCGAGGAGCG GCGGCGGGAA CGGATGGTGC TTGATCCGGA GTTGGCCCGC CAGGTGGAGA ATCTGAAGGC CAGGGTGCGG GCGTTGATTT TGGCGCCCAG CGCCCCGCTT CCGACCCGCA TCCGTTTTTG TGCCCGGTGC GCCTATGCCG AGTTCTGTTG GGCGTGA
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Protein sequence | MGIDAKFQEA APFHLQPVVG SMVNAYIICP RKAWLMSRQI CPDEDNTYLH LGRLIQNQSY GRERKEVRLE HLCLDLIRRE EETLVVAEVK KSSRAREAAR MQLAFYLYEL EQMGVEAEGE LLFPEERRRE RMVLDPELAR QVENLKARVR ALILAPSAPL PTRIRFCARC AYAEFCWA
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