Gene Daud_1727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_1727 
Symbol 
ID6026030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp1819043 
End bp1819648 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content56% 
IMG OID641594546 
Productphospholipid/glycerol acyltransferase 
Protein accessionYP_001717857 
Protein GI169831875 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID[TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00676958 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTACA CGTTGGCTAA GTTGATTTCT AAGTACTTTT TGTGGTTTTT GGGGAAACCG 
GCAATTGCCG GGCAAGAAAA CATCCCCCGC ACAGGCCCGG TGATTGTGGT GGCCAACCAC
ACCAGTCTTT TGGACGGCTT CCTCTTGGCG GCTTTTTGGC CGCGGCGGAT CACGTTTCTC
TCCGCAGCCT ACTTGTTCAG GTTGCCGGTA GTGGGAGCGT TTTTGCGTGC TATCGGCGCC
ATCCAGGTGC AAAACGAGAG GAGCGAGTTG GCGGGAATGA GGGCAGCCTT ACGGGTATTG
CAGGGAGGGG GTACCCTCGG GCTTTTCCCT GAGGGCCGGG TTTGTCAAAC GGACAAGCTT
TGTCCATTCC AAACAGGATG GGCGTATCTT GCCCTGAAGA CAGGGGCGCC GGTGCTGCCG
GTGGCGATCA AGGGAACCAG AACGGCACTG CCGGTAGGTG CCGTCTTCCC GCGCCGCAGT
AAAATCTTCA TGCAAATCGC TGCTCCGTGG ACGCTGGAAA AGGTCCGGCG ACCGGAACAG
GAAACATTGG CAGCTATGAA TATGAGACTG ATGAACCAAA TGGAGCAAAT GCTGAGTGAG
ATGTAG
 
Protein sequence
MTYTLAKLIS KYFLWFLGKP AIAGQENIPR TGPVIVVANH TSLLDGFLLA AFWPRRITFL 
SAAYLFRLPV VGAFLRAIGA IQVQNERSEL AGMRAALRVL QGGGTLGLFP EGRVCQTDKL
CPFQTGWAYL ALKTGAPVLP VAIKGTRTAL PVGAVFPRRS KIFMQIAAPW TLEKVRRPEQ
ETLAAMNMRL MNQMEQMLSE M