| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1715 |
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| Symbol | |
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| ID | 6025502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Desulforudis audaxviator MP104C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010424 |
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| Strand | - |
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| Start bp | 1806771 |
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| End bp | 1808582 |
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| Gene Length | 1812 bp |
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| Protein Length | 603 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641594534 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_001717845 |
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| Protein GI | 169831863 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGACGTA CGGGCAGGTA TGCACGAAGA ACCTTCTTTC TGGTACTGGT CGGGGGTATG
CTCGTGGCCG CCCTTGGCTT CGCCGCCGGG GGGATCGCCC TGGGGCCGCC GTCCCCGCGA
GAGACGAAGC CGGGGGCGCC TGCCCAGAGG GAGTTTCTCG CCAGCGTGTC GGAGGAGCTG
CACCACGTGC TTCTGCTGGA GAAGCTGCTG GAAAAATCCC CCCGGGAGAG TGAGGCGGGG
CTTTTCGAGC TTTCCCGCCG GGCAGATGCC GTGGGGTATC TGGCCAACCT CGAACTGGCT
CGCCGCTACC GGGAGGCAGG CCAAGACCCC TGGGCCTTCT ATCACCGGGC CCTTTCCCTG
CACGACTCGG CGCCGGTGCG CCGGGAATTG GCTTCCTGGC TGGAAGAGGC AGGACGCCAA
GCGGAGGCGC GGGAACACTA CCTCTTGCTC CTGCCGGACG AAAAGGCCCT GCAGGCGCTT
TTGCGCCTTG AGCAGGATCT CCCGGCCCTG GCCGAGGAAC TGCTGAAAAG AGAGCTCTGG
ACCGAGGCGG CCCGGGTCCT GGAGCCGCTG CTGGAGGGCC CCGAGGGCCC CCGGTTGGAG
CGGCCCTACC TTAGGGCCCT GGTGGGGATG CAGCGGTACG GGGAGGCCCT GCCCCGCCTG
GAAAGGTACT GGCGGGAAAA CCCGGCCGAT CTGGAGATGG GGTGGTGGTA CGCCCGCTGT
CTGGAAGTCG CCGGCCGGAG GGAAGCCGCC TTCGTGGTGT ACGGTCGCCT GGGGGCAAAG
GGCAGCTACC GCCGGGGGGT CATCCTGGAG CAGTGGGGGC GGCTGCCAGA GGCGGCCATC
GCCTTCAGCT CGGCCCCGGA GGCCGACGGC CGGTGGCGGG GAGCGCGGCT CTGGGAACAG
TTGGGCCGCC CTGATAAGGC CCTTCCCCTT TACGTGGCCC TGGGCCGCGA GCCGGGGCGC
TTGCAGGACG ACGCTGCCTT CCGGGCCTAC GTTCTCCTGT CCAGGAAAGG AGACCCGCTA
GCGGAAGACT TCCTGACCTA CCTCACCACC CATCCGGCCT GGATGGACCG CCTGGGGAAG
GAGCCCCGCT GGGTGGAGGA GGCGGCGCTG GGGGCGGCCA TCCCAGCCTT CTTGAAGAGG
GCTGAAGCCT ACCGGCAGTC CGGCCGGGGG GAACTCGCCC AACTGGAGCT CCGGATCGGA
GTCCGGCTGG CTTCCCTTCC GGAGAAGCTG GCCCTGGGAG AATGGTACCT GGAGGAGGGT
CACTACTTCG CCGGGGTCGG GCTGGGGATA GAGGTGCTCG GGGAACACCC CTGTGCCCGG
GCTTACCGGG TGGCCTATCC GCGGCCGTTC GCGGAACCGG TCTTAAAGGC CGCGGCCGAC
TATGGGCTCG ATCCCCGCCT CCTGTGGGCC GTGATGCGGG AGGAAAGCCA TTTTCGGCCC
GGGGCCGTCT CCCGGGCGGG GGCGCGGGGG CTGATGCAGA TCATGCCCGG TACGGGGGAA
TACATCGCCC GGCAGAAGGG AGTGGCCTTC GAAGTGGACG ACCTGTTCGA CCCGGAGACC
AACATCCGCT TCGGGGCTTT TTACCTGGCG TCCATGCTGA AGTCGTTCAG GGGCGACCTC
GACCGGGCGC TGGCCGCGTA CAACGCCGGC CCGGGCAACG CCGGGCGCTG GAGCAGGTCG
CCCCTGGGGC AGGACCCGCA CGGCTTCCCC ACGGCCGTCA CTTTCGCGGA AACCCGGGAG
TACATCACCA AGGTGAGGAA TTCCTATCTC GCCTACCTGT GGCTTTACGG GGAAAGTGAC
AGCCGGCCCT GA
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| Protein sequence | MRRTGRYARR TFFLVLVGGM LVAALGFAAG GIALGPPSPR ETKPGAPAQR EFLASVSEEL
HHVLLLEKLL EKSPRESEAG LFELSRRADA VGYLANLELA RRYREAGQDP WAFYHRALSL
HDSAPVRREL ASWLEEAGRQ AEAREHYLLL LPDEKALQAL LRLEQDLPAL AEELLKRELW
TEAARVLEPL LEGPEGPRLE RPYLRALVGM QRYGEALPRL ERYWRENPAD LEMGWWYARC
LEVAGRREAA FVVYGRLGAK GSYRRGVILE QWGRLPEAAI AFSSAPEADG RWRGARLWEQ
LGRPDKALPL YVALGREPGR LQDDAAFRAY VLLSRKGDPL AEDFLTYLTT HPAWMDRLGK
EPRWVEEAAL GAAIPAFLKR AEAYRQSGRG ELAQLELRIG VRLASLPEKL ALGEWYLEEG
HYFAGVGLGI EVLGEHPCAR AYRVAYPRPF AEPVLKAAAD YGLDPRLLWA VMREESHFRP
GAVSRAGARG LMQIMPGTGE YIARQKGVAF EVDDLFDPET NIRFGAFYLA SMLKSFRGDL
DRALAAYNAG PGNAGRWSRS PLGQDPHGFP TAVTFAETRE YITKVRNSYL AYLWLYGESD
SRP
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