| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1654 |
|---|
| Symbol | |
|---|
| ID | 6027669 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | - |
|---|
| Start bp | 1743516 |
|---|
| End bp | 1745081 |
|---|
| Gene Length | 1566 bp |
|---|
| Protein Length | 521 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641594476 |
|---|
| Product | integral membrane protein MviN |
|---|
| Protein accession | YP_001717787 |
|---|
| Protein GI | 169831805 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0728] Uncharacterized membrane protein, putative virulence factor |
|---|
| TIGRFAM ID | [TIGR01695] integral membrane protein MviN |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTACAG GTCAGGTAGT CGCCCGCGCC ACCATCGTGG TCATGATTAT GCTGGCCCTG
TCCCGGGTGC TGGGATTGGG GCGGGAGGCG GCCATCGCCC ACCAGTTCGG CGCCACGCAC
GCCACCGACG CCTACCTGGT GGCCTATACC ATCCCGAACA TCTTTTACGC CGTCGCCGGC
ATTGCGCTGG CCACCGTGAT CGTCCCGATC TTCACCGAGT ACGTCACCCA GGGCCGGCGC
GAAGAGGCCT GGCGGCTTTG CAGCCTGATC ACCAACGCCT TGATCCTGTT CACGGTGGTC
GGGTCCCTGA TCGGGATGAT CCTGGCTCCG GCGGTAGTCG GCGTACTGGG GAAGGGCTTC
GCCCCGGAGA CCTTCCGGCT GTCGGTCCAA CTGATGATGA TTATGATGCC TTCGATCGTG
TTCTTCAGCC TGGCCGGCCT GTTCACCGGC ATGCTGAACG CCAACAACGT GTTCGGGGTT
CCGGCCTTCG CCCCGGCGGC CATGAACATC GTAATCATTT CCGGCGCCCT GTTTCTGGGG
AATTACTACG GGGTCTACGG CCTAGCCGCC GGTGTGGTCG GCGGCGCCGC CGTAATGGCC
CTGATCCAGG TGCCGGTGCT GCGCCGCGCC GGTTTCCGCT ACCACCCCGA ACTGAACCTC
CGCCACCCCG AGGTGAAAAG GGTCCTGTAC CTGATGCTGC CGCTCACCCT GGGCCTTTCC
GTCAGCCAAG TGTACCTGAT GATCGACTGG GTGCTGGCCT CCGGGCTGGC CGAAGGCAGC
ATCGCCGCGC TGAACTACGC GAACAAACTG GTTCAACTCC CCCAGAGCCT TTTCGTGCTG
GCCGTGTCCA CGGCCATCTT TCCGACCTTG AGCCGCCATA TCGCCGAGGG GGATCCGGCC
GAGATGGTCC GCACTCTTAG ACGTGGGGTG AAGGTGGTTC TTTTACTCAC CGTCCCGGCG
GTGACCGGCT TGGTCCTCTT GCGCATCCCG ATCGTGACCC TGCTTTTCGA GCGAGGGGCT
TTCGACGAGC GGGCCACGGC GATGACTGCG GCGGCACTGC TTTTCTTCGC CATCGGCCTG
GTGGGGCATT GCCTGGTGAT GCTCATCAGC CGCGGCTTTT TCGCCATGCA GGACATGCGC
ACGCCGGTGA TGGTCACCGT CGGCACGCTG ACCGTGAAGG GCGGGGCGAG CCTCCTACTG
GTGGGGCCCA TGGCCCACGC CGGCTTGGCC CTGGCCACTT CGATCACCGC CGTCCTGAAT
GCGGTGCTCC TGATCTATCT CCTGCAGCGC CGCCTGCGCG GCGGCCTGAT CACGGCCGAC
CTGGTGCGTT TCCTGGGCGG GGTGTTGGTG GCCACCGGGG TGATGGGTCT GGTGGTGGTG
ACGGTGGACG CAGCTTTGGC CGCTTTTTTC CCTGCCGGTG GGCTTGGGCT GCTGGCCCGG
GTGGGACTGA CCATTGTGAC CGGCGCAATT GTTTATTTCT TTGCAGGGAT TTTGATCCGG
CTTGACGAAC TGTTAAATAT CCTCGGCTAT GCGCGCCGGA CCATTGCCGG CCGGCGGCCC
GCATGA
|
|---|
| Protein sequence | MSTGQVVARA TIVVMIMLAL SRVLGLGREA AIAHQFGATH ATDAYLVAYT IPNIFYAVAG
IALATVIVPI FTEYVTQGRR EEAWRLCSLI TNALILFTVV GSLIGMILAP AVVGVLGKGF
APETFRLSVQ LMMIMMPSIV FFSLAGLFTG MLNANNVFGV PAFAPAAMNI VIISGALFLG
NYYGVYGLAA GVVGGAAVMA LIQVPVLRRA GFRYHPELNL RHPEVKRVLY LMLPLTLGLS
VSQVYLMIDW VLASGLAEGS IAALNYANKL VQLPQSLFVL AVSTAIFPTL SRHIAEGDPA
EMVRTLRRGV KVVLLLTVPA VTGLVLLRIP IVTLLFERGA FDERATAMTA AALLFFAIGL
VGHCLVMLIS RGFFAMQDMR TPVMVTVGTL TVKGGASLLL VGPMAHAGLA LATSITAVLN
AVLLIYLLQR RLRGGLITAD LVRFLGGVLV ATGVMGLVVV TVDAALAAFF PAGGLGLLAR
VGLTIVTGAI VYFFAGILIR LDELLNILGY ARRTIAGRRP A
|
|---|
| |