Gene Daud_1548 details

Gene Information

• Locus tag: Daud_1548
• ID: 6027436
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Candidatus Desulforudis audaxviator MP104C
• Kingdom: Bacteria
• Replicon accession: NC_010424
• Strand: -
• Start bp: 1633043
• End bp: 1634890
• Gene Length: 1848 bp
• Protein Length: 615 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 641594371
• Product: hydrogenase, Fe-only
• Protein accession: YP_001717682
• Protein GI: 169831700
• COG category: [C] Energy production and conversion; [R] General function prediction only
• COG ID: [COG1034] NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G); [COG4624] Iron only hydrogenase large subunit, C-terminal domain
• TIGRFAM ID: [TIGR02512] hydrogenases, Fe-only

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCAGCAGG AGACAACGAC GACGGAAACC GGAATAAAAC GCGTAACGGA CAAAGAGGCG 
CAAGCGAGCG GGCACAAGGT GAAACTCATC ATCGACGGCC GGGAAGTGAC CGCTCCGGAA 
GGCGCCAACC TGGTGGACAC CGCCCGTGAG CACGGGATTG ACATCCCGAC CCTCTGCTAC 
CTGAAGGGCG TGAGTGAGCC TGGCTGCTGC CGGGTCTGCC TGGTCGAGGT CGAGGGGGCT 
CGAACCCTGC CGGCGGCGTG TGTTACGCCG GTGCGCGAGG GAATGGTGGT CCGGACCAAC 
ACGTCGCGGG TGCGGCGGAC CCGCCGCCGG GTGGTTGAAC TACTGCTGAC CGAGCACCAT 
GCCGACTGCC CCGTCTGCCC CCGGGCTGAA ACCTGCGAAC TGCGGGCGGT GGCGGCCCGG 
GTGGGGTTGA ACCGCCTCCG GCTGCCGAAC CGCCGACGCC GCCGCCAACT GCTCGAGGAA 
AACCCGTTTA TGGTCCGCGA TCCCGAGAAG TGTATCAAGT GCCGCCGCTG TGTTGAGGTC 
TGCCGCAAGA TCCAGGGCGT GGACGCACTG GGCGCGGCCG GTCGCGGATT CGACACGGTG 
ATCGGTCCGG CCTTCGGGGA CAACAGCGTC GAGGCCGCCT GCATCAGTTG CGGACAGTGC 
CTGATGAGTT GCCCGACCGG GGCGCTCACC GAGCGGGAAT ACATCCACGA AGTCTGGAAA 
GCGATCGACG ACCCCGACCG GCAGGTGGTG GTGCAGACGG CGCCCGCCAT CCAGGTGACG 
CTGGGCGAGG AATTCGGAAT GCCGGTCGGT ACGGTGGTCA CCGGCAAGAT GGTCTCGGCC 
CTCCGCCGTA TCGGCTTTGA CACCGTGTTC TCCACCGAGT TCGCGGCCGA CCTCACCATC 
ATGGAGGAAG CCCACGAACT CCTGGAACGG CTGGAAGGGA AGGGGGATTT GCCCCTGATC 
TCCTCCTGCA GTCCGGGATG GGTTAAGTTT TGCGAGCACT ACTACCCGGA GTTTCTGGAT 
AACCTGTCCA CCTGCAAGTC GCCCCAGGAG ATGCTGGGGG CCCTGGTCAA GAGTTACTAC 
GCCGAGAAGG AGGGCCTCGA CCCGGCCCGC CTGGTAACCG TGGCCGTCAT GCCCTGTACG 
GCCAAGAAGT TCGAGGCCGC TCGCCCGGAA CTGGTTTCCC GGGAAGGGCG GCGCGACGTG 
GATTTCGTGC TCACCACCCG CGAGGTGGCC CGGATGATCC GCCAGGCCGG AATCGACCTG 
GAAACCCTGG AAGACGGCGA GTTCGACCGG CCGCTCGGCA TTGCCACCGG GGCCGGGGTG 
ATTTTCGCGG CCACCGGGGG GGTGATGGAA GCGGCCATCC GCACCGCTTA TGCCCTGACC 
GAGGGGGAAG AAATGGCCCG GGTGGATTTC AAGGCGGTGC GCGGCTTGAA CGGTGTGCGC 
CTGGCCGAGG TGCACCTGCG GGGCCGGACC CTGAAACTGG CGGTGGCGCA CGGCACCCGC 
AATGCCCGGC GCTTGCTGGA GCAGATCAAG GCCGGGGCCG AGTACCACTT CCTAGAGATC 
ATGGGCTGCC CGGGAGGCTG CATCGGGGGC GGGGGACAGC CCATCCTCGG TGCCGGCCGC 
CGCGAACTGG CCCAGGAGTA CCGGCGCAAA CGGGCCGAGG CACTCTACAG TATCGACCTC 
AAGCGCGAGT TGCGCCGGGC CCACGAAAAC CCGGCGGTGC GCAAGCTCTA CGAGGAGTAC 
CTGGGTCACC CGCTGAGCGA CAAGGCCAAG GAGCTTTTGC ACACCACCTA CACCCCGCGG 
GGCCGTTATC CCCGGCGGCG GACGGAGGAA GCCGCCCGCC TGCACTGA 

 

Protein sequence

MQQETTTTET GIKRVTDKEA QASGHKVKLI IDGREVTAPE GANLVDTARE HGIDIPTLCY 
LKGVSEPGCC RVCLVEVEGA RTLPAACVTP VREGMVVRTN TSRVRRTRRR VVELLLTEHH 
ADCPVCPRAE TCELRAVAAR VGLNRLRLPN RRRRRQLLEE NPFMVRDPEK CIKCRRCVEV 
CRKIQGVDAL GAAGRGFDTV IGPAFGDNSV EAACISCGQC LMSCPTGALT EREYIHEVWK 
AIDDPDRQVV VQTAPAIQVT LGEEFGMPVG TVVTGKMVSA LRRIGFDTVF STEFAADLTI 
MEEAHELLER LEGKGDLPLI SSCSPGWVKF CEHYYPEFLD NLSTCKSPQE MLGALVKSYY 
AEKEGLDPAR LVTVAVMPCT AKKFEAARPE LVSREGRRDV DFVLTTREVA RMIRQAGIDL 
ETLEDGEFDR PLGIATGAGV IFAATGGVME AAIRTAYALT EGEEMARVDF KAVRGLNGVR 
LAEVHLRGRT LKLAVAHGTR NARRLLEQIK AGAEYHFLEI MGCPGGCIGG GGQPILGAGR 
RELAQEYRRK RAEALYSIDL KRELRRAHEN PAVRKLYEEY LGHPLSDKAK ELLHTTYTPR 
GRYPRRRTEE AARLH