Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daud_1533 |
Symbol | |
ID | 6025897 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Desulforudis audaxviator MP104C |
Kingdom | Bacteria |
Replicon accession | NC_010424 |
Strand | - |
Start bp | 1615323 |
End bp | 1617488 |
Gene Length | 2166 bp |
Protein Length | 721 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641594357 |
Product | Amylo-alpha-1,6-glucosidase |
Protein accession | YP_001717668 |
Protein GI | 169831686 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3408] Glycogen debranching enzyme |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.075154 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTGACT TGCGGATTGC GCCCCGGGAG ATCGAGGAAT CCTTCGAGGT TTTGAAGGAA GGGAACCTCT TCCTGACCAG CCTGCCCGGG GGGGATGTCC CGGGGCAGAG CTTGGCCGGT CTGGGCCTGT ACTACCAGGA CACCCGTTTT TTGAGCTGCC TGGAGCATTT CATCAGCAAC ACCCGACCGG TGTTGCTTTC CTCATCCACC CGCGGCAGCC ATTTCGGGCA GGTTGAGTTG ACCAACCCCG AACTCGAGAC GGCCGGCGGG GTCCGGCTGC CGCTGCAGAG CATTCACCTG CGCCTGGTGC GGGTGGTACG CGGCGCCCTG TACCAGCGCC TGAGGCTGGT GAACTACAAC CAGTTCGAGG TGTCCGTCCC CTTGAAGGTG CTGATGGGTG CCGATTTCCG GGACATCTTC GAAATCCGGG GGGCGCGACG GCTCCGGCGC GGGACCCATC TCCCCATGGT GCGTTCACAG AGTTCTTTTT TGCTTCGCTA CCGGGGGCTG GACGGGATTG TCCGGGGCTG CCACGCGGTG TTCGACCCGC CGCCCGGGGA CATCCGCGAG AGCGGGGACG GGGTGCTGTG CACCTTCGAT CTGGTGCTGC CCCCCCAGCG CAAGGTGTAC CTCACCTGGC TGGTCCGCCC GCTTCTGGAT CCCGGGGAGG AAGTGGTAAC GGAGTGGTCC GGTCGGCGCC TGGACATCGT TTTCGGGAAC GCCGTCGGCG AACAGGCCGA AGAACACCGG AAGTGGCGCA GCCGGAGCAC CATATTCGCA AGCGACAACG AAGTGTTCAA CCGGATGCTG GAACGGTACA CCTCCGACTT GCGGGCCCTG TACGCCGCCT ACCCGGACGG CCGGATCATC GAGGCGGGTA TTCCCTGGTA CGCGGCGCCG TTCGGCCGGG ACTCCCTGAT TACCGGCATC CAGACCCTGA TTTTGAACCC CGACCTGGCC CGCGACACGC TTTGTTTCTT GGGCCGCTAC CAGGGCCGCG GGGTGGACGA GAGCCGCGAG GTTCAACCCG GGAAAATACT GCACGAGCTG CGGCGCGGGG AAATGGCCAA CTGCGGGGAG ATTCTGCACA CACCCTACTT CGGCTCGGTC GACGCCACGC CACTTTTTGT CGTCCTCCTG GGCGAGTATT TCGCCTGGAC GGGAGACCGG GCGCTGCTGA CAGAGATGCG GGAGAACCTG GAATCCGCCC TGGCCTGGTG CCGGGAGTAC GGGGACCTCG ACGGGGACGG CTACCTGGAG TACCATGGCC GGGTGGAGGG CGGGCTGAAC AACCAGGGCT GGAAGGATTC CTGGGACGCT GTGGCCGATC CGGAGGGAAA CCTGGCCGAA CCGCCGATTG CACTCGTCGA AGTGCAGGGC TACTGGTACC ACGCCCTGGA GCACGCAGCC CGGCTCTTCA AGGTGCTCGG AGACGAACAC GGGGCCGGGC GGCTGCGGGC CGAGGCCCGG CGGTTGAAGG CGCGTTTCAT CCGGGATTTC CAGGTGCCGG GTGAAGAGTA CCTGGGATTC GCCCTGGACG GAAAGAAGCG GCTGGTGTCC ACCGTGGTTT CAAACATGGG ACACTGCCTC TGGAGCGGCA TTCTGGACCC GGGGCCGGCT GCCCAGGTGG TGCGGCGGAT CTTCCGGCCC GACATGCATT CCGGCTGGGG CATCCGAACC ATGAGCCGGT GGGAAAAAGC GTACAACCCG ATGAGCTACC ACAACGGATC GGTCTGGCCC CACGACAACG CCATTATCGC CGCGGGCTTG CGCCGGTACG GCTTCCTGAA CCAGATGGAA CAACTGTTCA CCGGCCTTTT CGAGGCGGCG CAGCACTTTC CCTACCAGCG CCTGCCCGAA CTCTTCTGCG GGTTTGCGAG GCGCCCCACC GGGGAGCCGG TGCGCTACCC CATCGCCTGT GATCCCCAGG CTTGGGCGGT CGGGGCCATG TTCATGTTCT TGCAGGCGGC ACTGGGTTTG AGCTGCTCCC GGAAGGGCCT GCAGGTCACG AAACCGATGC TGCCGGGCTG GCTGCGAGAG CTGACCGTCC AGAACATGCG GGTACGCGGC GGCACGGTGG ATCTGCGGTT CAGCCGTTCC CGCGGGGTGA CACGCTGCGA GCTGCTCCGC AAAGAGGGCC GTTTTACCGT TTCCATCGAG GAGTAA
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Protein sequence | MLDLRIAPRE IEESFEVLKE GNLFLTSLPG GDVPGQSLAG LGLYYQDTRF LSCLEHFISN TRPVLLSSST RGSHFGQVEL TNPELETAGG VRLPLQSIHL RLVRVVRGAL YQRLRLVNYN QFEVSVPLKV LMGADFRDIF EIRGARRLRR GTHLPMVRSQ SSFLLRYRGL DGIVRGCHAV FDPPPGDIRE SGDGVLCTFD LVLPPQRKVY LTWLVRPLLD PGEEVVTEWS GRRLDIVFGN AVGEQAEEHR KWRSRSTIFA SDNEVFNRML ERYTSDLRAL YAAYPDGRII EAGIPWYAAP FGRDSLITGI QTLILNPDLA RDTLCFLGRY QGRGVDESRE VQPGKILHEL RRGEMANCGE ILHTPYFGSV DATPLFVVLL GEYFAWTGDR ALLTEMRENL ESALAWCREY GDLDGDGYLE YHGRVEGGLN NQGWKDSWDA VADPEGNLAE PPIALVEVQG YWYHALEHAA RLFKVLGDEH GAGRLRAEAR RLKARFIRDF QVPGEEYLGF ALDGKKRLVS TVVSNMGHCL WSGILDPGPA AQVVRRIFRP DMHSGWGIRT MSRWEKAYNP MSYHNGSVWP HDNAIIAAGL RRYGFLNQME QLFTGLFEAA QHFPYQRLPE LFCGFARRPT GEPVRYPIAC DPQAWAVGAM FMFLQAALGL SCSRKGLQVT KPMLPGWLRE LTVQNMRVRG GTVDLRFSRS RGVTRCELLR KEGRFTVSIE E
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