Gene Daud_1505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_1505 
Symbol 
ID6026513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp1588539 
End bp1589324 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content66% 
IMG OID641594329 
Productribonuclease PH 
Protein accessionYP_001717643 
Protein GI169831661 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0689] RNase PH 
TIGRFAM ID[TIGR01966] ribonuclease PH 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCGAG TGGACGGCCG GGCCCCGGCG CAGATGCGCC CGGTGTACAT CACCCGGCAC 
TACAACAAAT ACGCCGAGGG TTCCGCCTTG ATTGAGGTGG GTGACACCCG CGTGATCTGC
ACGGCCAGTA TCGATAACCG GGTGCCCACC TTCCTGAAAG GCGCGGGCAA GGGCTGGGTG
ACCGCGGAGT TTGGGATGCT GCCCCGGGCC ACCGGGGTCC GGGGGATCCG GGAAAGTGTG
AAAGGCCACC CCGGGGGGCG CAGCCTGGAA ATCCAGAGAT TGATTGGCCG CTCCCTGCGT
GCGGTAGTCG ACCTGCCCGC CCTGGGGGAG CGTACCGTCA TCCTGGACTG TGACGTGATC
CAGGCCGACG GCGGGACCCG GACGGCCGCC ATCACCGGGG GTTTTGTGGC CCTGGTAGAC
GCCATGCAGA CCTTGGTGAC TGAGGGCGTG ACCCCGCGGT TGCCGGTGCT GGACTACGTG
GCGGCGACCA GCGTGGGCCT GTTCGAGGGG GAGGCCGTCC TTGACCTGTG CTTTGCGGAG
GACTCGGCGG CGGAGGTGGA TTTCAACGTG GTGATGACCG GGACGGGCCG TTTCGTGGAA
GTACAGGGAA CCGGGGAAGG AACGACCTTC GAACGGGCGG ACGTCGACCG GCTGCTTGAC
CTGGCGGTTG TCGGAATCCG GAGCCTGGTG GAGCAACAGC GGGCGGTTCT GGGTTCGCTG
GCCGAAGAGA TCGGGAAGCG GAGGGGAAAT CAAAATGGCG CGGCTGGTAC TGGCGACCAG
AAATGA
 
Protein sequence
MIRVDGRAPA QMRPVYITRH YNKYAEGSAL IEVGDTRVIC TASIDNRVPT FLKGAGKGWV 
TAEFGMLPRA TGVRGIRESV KGHPGGRSLE IQRLIGRSLR AVVDLPALGE RTVILDCDVI
QADGGTRTAA ITGGFVALVD AMQTLVTEGV TPRLPVLDYV AATSVGLFEG EAVLDLCFAE
DSAAEVDFNV VMTGTGRFVE VQGTGEGTTF ERADVDRLLD LAVVGIRSLV EQQRAVLGSL
AEEIGKRRGN QNGAAGTGDQ K