| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1474 |
|---|
| Symbol | |
|---|
| ID | 6027540 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | + |
|---|
| Start bp | 1557022 |
|---|
| End bp | 1558020 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641594292 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001717612 |
|---|
| Protein GI | 169831630 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000000729086 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACAGAA TACTTTCAAT CGCCGCCGCC ATAACCGTCC TGGCTGCCGG AGCAGCGGCC
GCCTGGTTCT TCACACATCA CCCGGAACCG GAGGTGCACC GCCTCTCAGT GCGGGAAACA
GCACGCGAGA TAGCCTACCT GCCCCACTAC CTGGCGGCGG CCTTGGGCTA CTTCGAGGAC
AACGGCCTGC ACCTGAGCCT GACCACCGCA CCCCGGGGGA TAGTGGACCC GGCCCAGGAC
AAAGCCGAAC TCTACCTCAC CCCTCTGGAC CGGTTGATGG TCGACGGGCC GGTGGCCTTC
GCGGCCCTGA CCGGAAAAGA CCCTAACTTC TTACTTGGCC GGGAAGCAAA ACCGGACTTT
AAGTGGGAGA ATCTAAAGGA GTACACCGTG ATCGGCGACC CGCCCGACAC CGTCGGGGAG
GTGGCGCTGG AGGAAATCCT GCGGCGCCTC GAACTGGTGC CCCAGACCCA CGTCACCATC
ATCCAGCACC TGCCGGTGCA TCTCCGGGTG GGCGCTTTTC TGTCCGGGAC AGGAAGTTTC
ATCATCCTGC CGGATCCCAT GGCCGCCTAC CTGGAGAAGT CCGAAACCGG CTACGTCCTG
GTTTCGCTCG CGGAGGCCGG CGAGATTCCG TCCCGGGTCT GCGCGGCCAC GCCAGAGTTT
TTGCAGACCC ACCCCGACGT CGCCCTGGGG TACTGCTTAG CCGTCTTCCA GGCCCAAGAA
TGGATCGCGC AAAAGAGTCC CGAGGAAATC GCCGTCGTCG CAGCGCCTTT CTTCCCCTAC
CTCGACCTCG AAACTCTGAC CCGGGTAATC GCCCGGAACA AGGAGACCAG GCTCTGGGCC
CCAAACCCGC TGGTTGAGGA AAACGCCTAC CAGAACCTGC AGAACTGGTT GATCCAGTCC
GGGGAGTTGC CCCAGGCCGT GCCCTACCAC CAGGCCGTGG AACCTTCGTT CGCCCGCGAG
GCGGTGGAGG GGGGCGCACT CCCAGTCCCC CAGCAATGA
|
|---|
| Protein sequence | MHRILSIAAA ITVLAAGAAA AWFFTHHPEP EVHRLSVRET AREIAYLPHY LAAALGYFED
NGLHLSLTTA PRGIVDPAQD KAELYLTPLD RLMVDGPVAF AALTGKDPNF LLGREAKPDF
KWENLKEYTV IGDPPDTVGE VALEEILRRL ELVPQTHVTI IQHLPVHLRV GAFLSGTGSF
IILPDPMAAY LEKSETGYVL VSLAEAGEIP SRVCAATPEF LQTHPDVALG YCLAVFQAQE
WIAQKSPEEI AVVAAPFFPY LDLETLTRVI ARNKETRLWA PNPLVEENAY QNLQNWLIQS
GELPQAVPYH QAVEPSFARE AVEGGALPVP QQ
|
|---|
| |