Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daud_1440 |
Symbol | |
ID | 6026280 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Desulforudis audaxviator MP104C |
Kingdom | Bacteria |
Replicon accession | NC_010424 |
Strand | - |
Start bp | 1522349 |
End bp | 1523761 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641594259 |
Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase |
Protein accession | YP_001717579 |
Protein GI | 169831597 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAACGA TCACGATCGC AGAGATTAGG GCTGTGACCG GGGCCGAGAT AATTCAGGGG GAGCCGTCCG CCCGGGTGAA GCGGGTGACG ACCGACACCA GAGTGCTTGC CGGCGGCGAA CTGTTTGTCG CGCTGCGGGG TTCCCGATTC GACGGGCACG ATTTCGCTGG GCAGGCGGTG GACCGCGGGG CTTGCGGGCT GCTGGTCAGC CGGGAGGTGT CTGTTCCCTC CGGCGTCGCC GTGCTGAAAG TCGCCGACAC GCTGACGGCG CTGCAGGCGC TGGCGCTGGA CAACCGGCGG CGCTGCGGCC TCCCGGTGAT TGCCGTCACC GGCAGCACGG GGAAAACCAC CACCAAGGAT CTGCTGACGG CCGTGCTTGC GGCCCGCTTT CGGGTCTTGG CCACCCGCGA GAACCTGAAC AACGAGATCG GCCTGCCCTT GACGCTCCTG GATGTAGACC CCGTTCACGA GGTGGCGGTG GTCGAGCTCG GAATGCGGGC TCCGGGCGAA ATCGATCTCC TGGCCCGGAT TTGTGAGCCT ACGGGAGGCG TGATCACCAA CATCGGCGAG ACCCACCTGG AACTCCTGGG CTCGGTGGCG AATATCGCCC GGGCCAAGGG AGAGCTTCTG GACCATATTC CCCCTTCCGG GTTCGCCGTA CTGCACGCCG AGAGCCCTGG AATGGATGAG CAGGCCCGAC GGTGCCGGGG GCGGGTGGTG CGCTTTGGGG AATCTGAATC CGCCGACTTC CGGCTTCTTG ACTACCGTGC CCTACCGGAC GGCTCTGTCT TCCGGGTGCG GTCCGCGGGG GGGGACGAAG AGTACTATCT GCCGCTTTTC GGCCGACACA CGGCGCTGAA CGCCCTGGCG GCGATCGCGG TCGGGTTGGA ACTGGGCCTG GCGGTGAGTG AAATCCGCGC CGGTTTGGAG CAGGCCCGCG CTTCATCCCT GCGGCAGGCC ATTGTTAAGG CCGGCGGTCT GACTATTATC AACGACACTT ACAATGCCAG CCCCGCTTCG GTCAAGGCTG CGCTCGAGGT TCTAGCCGAG ATTGCCGCTG GGCGATCTAC GGTGGCGATC CTCGGCGGCA TGCTGGAGTT GGGCCCGCGT TCTTCGGAAG CGCACCGGGA GGTAGGGATG GCCTGTGCCC ACGCCGGTGT AGGTCAACTG GTGACGATGG GTGAGTTGGC GGTGGGAATC GCTGACGGCG CCCGTGAAGC CGGGTTGCCT GCCTCCCGGA TCTGGGCATG CCACACACTT GAAGAAACCG TTGACACCGC CCGCCGGTTG GCGGGGGAAA ACGTGGTGAT TTTAGTCAAA GGCTCACGCG CGTTCCAGAT GGAGCGGATT GTGAAAGGTC TTGCGGAAGC GGCCACGCCG GCCGCGGGCG GTACGAGGAG GGACGGTCGT TGA
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Protein sequence | MRTITIAEIR AVTGAEIIQG EPSARVKRVT TDTRVLAGGE LFVALRGSRF DGHDFAGQAV DRGACGLLVS REVSVPSGVA VLKVADTLTA LQALALDNRR RCGLPVIAVT GSTGKTTTKD LLTAVLAARF RVLATRENLN NEIGLPLTLL DVDPVHEVAV VELGMRAPGE IDLLARICEP TGGVITNIGE THLELLGSVA NIARAKGELL DHIPPSGFAV LHAESPGMDE QARRCRGRVV RFGESESADF RLLDYRALPD GSVFRVRSAG GDEEYYLPLF GRHTALNALA AIAVGLELGL AVSEIRAGLE QARASSLRQA IVKAGGLTII NDTYNASPAS VKAALEVLAE IAAGRSTVAI LGGMLELGPR SSEAHREVGM ACAHAGVGQL VTMGELAVGI ADGAREAGLP ASRIWACHTL EETVDTARRL AGENVVILVK GSRAFQMERI VKGLAEAATP AAGGTRRDGR
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