| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1419 |
|---|
| Symbol | |
|---|
| ID | 6025777 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | - |
|---|
| Start bp | 1502747 |
|---|
| End bp | 1503442 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641594238 |
|---|
| Product | two component transcriptional regulator |
|---|
| Protein accession | YP_001717558 |
|---|
| Protein GI | 169831576 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0720218 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAGGA TTCTGGTGGT TGAGGACGAA AAACACATTG TCGAGCTGAT GCGGTACGGC
CTCGAGAAAG AGGGCTTTCA AGTAGTGGAG GCCAACGACG GCGACCGGGC GTTGGAAATG
GTCCACACCG GGCGGATCGA CCTGGTGGTC CTGGACATTA TGCTGCCCGG GCTGGACGGC
CTGACCGTCT GCCGCCTGTT GCGCCAGAAC GAGCGCACCC GGGATATCCC GGTAATCATC
CTCAGCGCCC GGGGTCAGGA GCTGGACCGC GTGCTCGGCC TGGAACTGGG CGCGGACGAC
TATATTACCA AGCCGTTCAG CGTCCGGGAA TTGGTCGCGC GGGTCAAAGC GCGGCTGCGC
CGTCACGTCC CGGTACAGGA GGCGCGGAAG ACGGCCCGGT TCGGCGACCT GGTGGTCGAT
CCGGAGCGCC TGGCGGTGGA GGCGGCGGGA AAGCGGGAGC AACTGACGCC CACCGAATTC
GAGTTATTGT GGGTATTGGC CGGGAGCCCC GGCCGGGTTT TCTCCCGCGA ATTGCTGCTC
CAGAAGGTCT GGGGCTATGA TTATACGGGG GATTCCCGCA CTGTAGACGT GCATATCCGT
CACGTGCGGC AAAAGCTGCA GCGGCTGCCC GGAAGCCCCC AGTACATTGA AACGGTGCGC
GGAGTCGGCT ACCGTTTCCG GGAGTTGAGC GAATGA
|
|---|
| Protein sequence | MARILVVEDE KHIVELMRYG LEKEGFQVVE ANDGDRALEM VHTGRIDLVV LDIMLPGLDG
LTVCRLLRQN ERTRDIPVII LSARGQELDR VLGLELGADD YITKPFSVRE LVARVKARLR
RHVPVQEARK TARFGDLVVD PERLAVEAAG KREQLTPTEF ELLWVLAGSP GRVFSRELLL
QKVWGYDYTG DSRTVDVHIR HVRQKLQRLP GSPQYIETVR GVGYRFRELS E
|
|---|
| |