Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daud_1379 |
Symbol | |
ID | 6026196 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Desulforudis audaxviator MP104C |
Kingdom | Bacteria |
Replicon accession | NC_010424 |
Strand | - |
Start bp | 1462895 |
End bp | 1463713 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641594199 |
Product | tRNA/rRNA methyltransferase (SpoU) |
Protein accession | YP_001717520 |
Protein GI | 169831538 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0566] rRNA methylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000452495 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAGATTA CCTCACGGTC CAACGAACGC ATCAAGTACC TGAAAAAGTT TCACGAAAAG AAGCACCGGG ACCTGGAAAA CGGCTTTTTG GCCGAGGGCC TCAAGGTGAT TGAAGAAGCC CTGCAAGCCG GCTGGGAGGT GCGAATGCTG CTCTATACTT CGGATGTGCT CCGCCACCCG CGTGGCGTGG CACTTCTGGA CAAGGCGCGC GCCACCGGAA CCGAGCTCTG GGAATGTGAA AAACAGGTGC TGGCCGTGGT GACCGATACC AAGACCCCCC AGGGAGCATT GGCGCTGATC GCGAAGCCGG AACATTCACT TGATGTCCTG CTGCAGGGCC GGGGTACCCC GCTGGTGGTG GTTCTGGACG GCCTGCAGGA TCCGGGCAAC CTGGGCACCA TCATCAGGAC GGCCGACGCG TGTGAACTCC AGGGCGTCAT TACCCTCGAG GGCACCGTGG ACTTGTTTCA CCCGAAGGTC GTAAGAGCCT CGGCCGGGGC TTTGTTTCAC CTGCCGGCTT TTGGGGACCT GCCTGCTCCG GCGGTCCTGG AGTTCTTCAC TGGCGCCGGC GTTCAGAAGT TCGTGGCGGA TCCCCGCGGC GATTACTCCC TGTACGAGTG CGACTTCAGC CGGCCGACCG CGCTGTTCAT GGGCAACGAG GCCCGGGGTT GCGGGGAAAT GCTCCACGCC GCAGCCGACC GGGTGGTAGC CATACCCATG CCCGGTCAGG CCGAGTCTTT AAATGTCGGC GTTGCCGCCT CGCTTTTCAT CTACGAAGCC GTGCGGCAGA GGCTCAAATC TTCCTTGTCT TTGCCTTGA
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Protein sequence | MKITSRSNER IKYLKKFHEK KHRDLENGFL AEGLKVIEEA LQAGWEVRML LYTSDVLRHP RGVALLDKAR ATGTELWECE KQVLAVVTDT KTPQGALALI AKPEHSLDVL LQGRGTPLVV VLDGLQDPGN LGTIIRTADA CELQGVITLE GTVDLFHPKV VRASAGALFH LPAFGDLPAP AVLEFFTGAG VQKFVADPRG DYSLYECDFS RPTALFMGNE ARGCGEMLHA AADRVVAIPM PGQAESLNVG VAASLFIYEA VRQRLKSSLS LP
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