Gene Daud_1379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_1379 
Symbol 
ID6026196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp1462895 
End bp1463713 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content61% 
IMG OID641594199 
ProducttRNA/rRNA methyltransferase (SpoU) 
Protein accessionYP_001717520 
Protein GI169831538 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000452495 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGATTA CCTCACGGTC CAACGAACGC ATCAAGTACC TGAAAAAGTT TCACGAAAAG 
AAGCACCGGG ACCTGGAAAA CGGCTTTTTG GCCGAGGGCC TCAAGGTGAT TGAAGAAGCC
CTGCAAGCCG GCTGGGAGGT GCGAATGCTG CTCTATACTT CGGATGTGCT CCGCCACCCG
CGTGGCGTGG CACTTCTGGA CAAGGCGCGC GCCACCGGAA CCGAGCTCTG GGAATGTGAA
AAACAGGTGC TGGCCGTGGT GACCGATACC AAGACCCCCC AGGGAGCATT GGCGCTGATC
GCGAAGCCGG AACATTCACT TGATGTCCTG CTGCAGGGCC GGGGTACCCC GCTGGTGGTG
GTTCTGGACG GCCTGCAGGA TCCGGGCAAC CTGGGCACCA TCATCAGGAC GGCCGACGCG
TGTGAACTCC AGGGCGTCAT TACCCTCGAG GGCACCGTGG ACTTGTTTCA CCCGAAGGTC
GTAAGAGCCT CGGCCGGGGC TTTGTTTCAC CTGCCGGCTT TTGGGGACCT GCCTGCTCCG
GCGGTCCTGG AGTTCTTCAC TGGCGCCGGC GTTCAGAAGT TCGTGGCGGA TCCCCGCGGC
GATTACTCCC TGTACGAGTG CGACTTCAGC CGGCCGACCG CGCTGTTCAT GGGCAACGAG
GCCCGGGGTT GCGGGGAAAT GCTCCACGCC GCAGCCGACC GGGTGGTAGC CATACCCATG
CCCGGTCAGG CCGAGTCTTT AAATGTCGGC GTTGCCGCCT CGCTTTTCAT CTACGAAGCC
GTGCGGCAGA GGCTCAAATC TTCCTTGTCT TTGCCTTGA
 
Protein sequence
MKITSRSNER IKYLKKFHEK KHRDLENGFL AEGLKVIEEA LQAGWEVRML LYTSDVLRHP 
RGVALLDKAR ATGTELWECE KQVLAVVTDT KTPQGALALI AKPEHSLDVL LQGRGTPLVV
VLDGLQDPGN LGTIIRTADA CELQGVITLE GTVDLFHPKV VRASAGALFH LPAFGDLPAP
AVLEFFTGAG VQKFVADPRG DYSLYECDFS RPTALFMGNE ARGCGEMLHA AADRVVAIPM
PGQAESLNVG VAASLFIYEA VRQRLKSSLS LP