Gene Daud_1368 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_1368 
Symbol 
ID6026061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp1446108 
End bp1447406 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content62% 
IMG OID641594188 
Producttyrosyl-tRNA synthetase 
Protein accessionYP_001717509 
Protein GI169831527 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0162] Tyrosyl-tRNA synthetase 
TIGRFAM ID[TIGR00234] tyrosyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0107166 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTGTGGG GAGAAGATGT TCATCCGGAC AAGCTATTGT TGGTGGGAGA TGCCTATCAT 
TCTGTCGTTG GGGGTTTCAT CTGCATGTCG GAGCTGGACA GGCAACTGGA AATCATCAGA
AGGGGCGCGG TCGAGATCAT CCCCGAGGAC GAACTGAAGG AAAAGCTCCG CCGTTCCCTG
GCCACCGGGC GCCCCCTGCA GGTCAAGCTG GGGCTTGACC CCACGGCCCC GGACATTCAT
CTGGGTCACA CCGTGGTGCT GCACAAGCTG AGACACTTTC AGGATCTGGG CCACCAGGTG
ACGCTGGTGC TCGGCGATTA CACGGCCCGG GTGGGTGACC CATCGGGCAA GACCGAGACC
CGGAAGCCGC TGACCGGGGA AGAGGTAATG GCCAACGCCC GCACCTATGA GGCCCAGGTT
TTCAAGATTC TCGACCCTAA CCGCACCCGG GTCCGCTTCA ACAGCGAATG GCTGGCCCCT
CTGGACTTCG CCGCGGTGCT TGAACTGGCC TCCAAATACA CGGTGGCCCG AATGCTGGAG
CGCGACGACT TCGCGAAGCG TTTTCACGGG GGCTTGCCGA TCAGCATTCA CGAGTTCTTC
TACCCTCTAA TGCAAGGCTA CGACTCGGTG GCGCTGAAGG CCGACGTCGA GCTGGGCGGA
ACCGACCAGA AATTCAACCT GCTCATGGGC CGCACCCTTC AGAAGGAATA CGGCCAGGAA
CCCCAGGTCG CTCTCACCAC ACCCCTCCTG GAGGGCCTGG ACGGGGTTCA CAAGATGAGC
AAGAGCCTAG GCAATTACAT CGGCATCACC GAACCGCCGG AAGAGATGTA CGGCAAATTG
ATGTCCTTGA GCGACGACCT GATGGTGCGC TACTTCGAGC TGGTCACGCC CGTTTCCCTG
GAGGAACTGC GGGCCTTGAA AACCGGCCTT GAGACCGGGA CGGTTCATCC CCGGGACTTA
AAGATGCGCC TGGCGCGTAC CGTTGTGGAA ACATACCACG GTAAAAAAGC GGCCGCCGTT
GCGGAGGACG AGTTCCGCAA AGTATTTCAG CAGCGGGAGC TGCCCACCGA CATCCCCGAC
TTCCCCGTGC CGGCCGGCGC GCTCACCGGC GGCCGGATTT GGCTGCCCAA GCTGTTGGTG
CTGGCCGGGC TGTGCTCAAG CACGAGCGAG GCGCGCCGGC TGATCGGGCA GGGTGCCGTC
AAGGTAGACG AGCAGCGGGT GGTTGACGAG AATGAAATCA CGCCTCGCAC CGGAATGATC
ATCCGGGTGG GACGGCGAAA GTTCACCCGC CTCCTGTGA
 
Protein sequence
MVWGEDVHPD KLLLVGDAYH SVVGGFICMS ELDRQLEIIR RGAVEIIPED ELKEKLRRSL 
ATGRPLQVKL GLDPTAPDIH LGHTVVLHKL RHFQDLGHQV TLVLGDYTAR VGDPSGKTET
RKPLTGEEVM ANARTYEAQV FKILDPNRTR VRFNSEWLAP LDFAAVLELA SKYTVARMLE
RDDFAKRFHG GLPISIHEFF YPLMQGYDSV ALKADVELGG TDQKFNLLMG RTLQKEYGQE
PQVALTTPLL EGLDGVHKMS KSLGNYIGIT EPPEEMYGKL MSLSDDLMVR YFELVTPVSL
EELRALKTGL ETGTVHPRDL KMRLARTVVE TYHGKKAAAV AEDEFRKVFQ QRELPTDIPD
FPVPAGALTG GRIWLPKLLV LAGLCSSTSE ARRLIGQGAV KVDEQRVVDE NEITPRTGMI
IRVGRRKFTR LL