Gene Daud_1289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_1289 
Symbol 
ID6025647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand- 
Start bp1361496 
End bp1362416 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content60% 
IMG OID641594106 
ProductCRISPR-associated Cas1 family protein 
Protein accessionYP_001717432 
Protein GI169831450 
COG category[L] Replication, recombination and repair 
COG ID[COG1518] Uncharacterized protein predicted to be involved in DNA repair 
TIGRFAM ID[TIGR00287] CRISPR-associated endonuclease Cas1 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATCTTG TCGTTTCGGA CTACGGATGT GCGCTGGGGA AAAAGAGCGA GCGGCTGTTG 
GTGCGGCAAA AGGGAGAAGT GTTGAGTGAG ACCCCGTTTT ACGACATAAA ACAGATCACC 
ATTTCCGGCC GCGGGGTTTC TCTTTCCACG GATGTGATTC AGGAATGCCT GGAGCATGGC 
ATCCAGATCA ACTTCATATC CTTCTCCGGC AAACCGTACG CCAAACTGGC GGCGCCGAAC 
CTGACCGGCA CGGTGCTCAC CCGGCGGGAA CAGTTGAAGG CCTACGACGA CCGGCGGGGC 
GTAATCCTGG CGAAGGCATT TGTCGAGGGG AAGCTGAAGA ACCAGGTCAA CGTGCTCAAG 
TATTTCGCCA AGTACCGGCG CAGCGCCGAC ACGGAAAAGT ATGCGGAGAT CTACCGGAAG 
ATCGAGGAGA TCGATCGGAT TCGCAGCCAG CTGGCAACTC TGGATGCCGC GCGGATTGAC 
GATCTGCGGG GGCAGTTGTT CGCGATCGAG GGACGGGGGG CGCATCACTA CTGGGACGCC 
CTGGGGCTGA TCATCGGGGA CCGCATCGAG TTCCCCGGCC GGGAACGCCG TGGGGCGACC 
GACCCCGTCA ATTCGGCGCT CAATTACGGC TATGGCATTC TGTACTCCCA GGTGGAAGGG 
GCCGTCCTTC TGGCCGGTCT TGACTCCTTC GGCGGCTTCC TTCACACCGA CCGCCCCGGC 
AAGCCATCCA TGGTGCTGGA TCTGGTGGAG GAGTTCCGGG CGGTGACCGT GGACCGGGTG 
GTCGTTGCGA TGGTGACCAA AGGGCCCGGT ATCGAAATGG ATGGGGACAA GCTGACCGAT 
GAAACAGAAA GGAGTTGGGC CGGCGGGTCT TGGAACGCCT GGAAGGCGAA GAGAGCTTCG 
AGGGCAAGAA ACACAAGCTG A
 
Protein sequence
MHLVVSDYGC ALGKKSERLL VRQKGEVLSE TPFYDIKQIT ISGRGVSLST DVIQECLEHG 
IQINFISFSG KPYAKLAAPN LTGTVLTRRE QLKAYDDRRG VILAKAFVEG KLKNQVNVLK 
YFAKYRRSAD TEKYAEIYRK IEEIDRIRSQ LATLDAARID DLRGQLFAIE GRGAHHYWDA 
LGLIIGDRIE FPGRERRGAT DPVNSALNYG YGILYSQVEG AVLLAGLDSF GGFLHTDRPG 
KPSMVLDLVE EFRAVTVDRV VVAMVTKGPG IEMDGDKLTD ETERSWAGGS WNAWKAKRAS 
RARNTS