Gene Daud_1281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_1281 
Symbol 
ID6025730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp1351182 
End bp1352375 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content71% 
IMG OID641594098 
Productphosphopentomutase 
Protein accessionYP_001717424 
Protein GI169831442 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1015] Phosphopentomutase 
TIGRFAM ID[TIGR01696] phosphopentomutase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.477667 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGGCCCCG TCAAGCGGGT GATCCTGATC GTTTTGGACA GCGTCGGGGT GGGAGAGCTG 
CCGGATGCCG CCGCGTACGG CGACGCGGGC ACGAACACCC TGGCGAACAC CGCCCGGGCC
GTGGGCGGCC TGTCCCTGCC GCACTTGGAG GCCCTGGGGC TGGGGAACAT CATCCCGGTC
CCGGGCGTGC CACCGGCCTC GCGCCCGCGG GCGGCCTACG GGAAGATGGC CACCCTGTCC
GCCGGGAAGG ACACCACCAC GGGACACTGG GAGCTGGCGG GGCTCGTGCT GGACCGGCCG
TTTCCGGTGT ACCCGGACGG TTTCCCGGCG GCGCTGATCG CGGCCTTCGA GGCGCGGATC
GGCCGCCCGA CCCTGGGGAA CCGGCCGGCT TCGGGCACGG CGATCATCGA AGAGCTGGGT
GCCGAGCACG TGCGCACCGG CGCGCCGATT GTGTACACCT CGGCGGACAG CGTATTCCAG
GTGGCCGCCC ACGAGGAAGT TATCCCGGTG GAGGAGCTTT ACCGGATCTG CCGGGTGGCG
CGGGAGCTTT TAACCGGCGA GCACGCGCCT GCGCGGGTGA TCGCCCGGCC GTTTGCGGGC
CCGCCGGGGC GCTTCGTGCG CACGCCGCGC CGCAAAGATT TCTCCCTGCC GCCGAGCGGG
GAGACCATCC TGGACGCCCT GAAAAAGCGG GGCCACGCGG TAGTGGGTGT GGGGAAGATC
GGGAACATCT TCGCCGAGCG GGGCTTGACC GAGAGTTTTC CCACCAGGGA CAACGAGCAG
GGGGTGGACC GGACGCTCGC GGTGCTGCGC ACCTTTCCGT CCGGGCTGGT GTTCACCAAC
CTGATCGAGT TTGACATGCT CTACGGTCAC CGGAACGACG CGCACGGTTA CGCCGCGGCG
CTGGCGGCCT TTGACCGGCG GCTGCCGGAG ATTCTCGGAG CCCTTGCGAC GGAGGACCTC
CTGGTGCTCA CCGCCGACCA CGGGTGCGAC CCGACCACGG CCGGCACCGA CCACACGCGC
GAGTACGTGC CCCTGCTGGC GCTGGGGCCG CGCCTGCGCG GCGGGGTGGA CCTGGGGACG
CGGGCCTCCC TGGCCGACGT GGCCGCGACG GTGGCGGAGG TGTTCGGTTT CGGGTGGCCG
GTGGGGACGA GTTTTTACGG GCGGCTCGTC CCGGAAGGGG GCGGGCGGCC TTGA
 
Protein sequence
MGPVKRVILI VLDSVGVGEL PDAAAYGDAG TNTLANTARA VGGLSLPHLE ALGLGNIIPV 
PGVPPASRPR AAYGKMATLS AGKDTTTGHW ELAGLVLDRP FPVYPDGFPA ALIAAFEARI
GRPTLGNRPA SGTAIIEELG AEHVRTGAPI VYTSADSVFQ VAAHEEVIPV EELYRICRVA
RELLTGEHAP ARVIARPFAG PPGRFVRTPR RKDFSLPPSG ETILDALKKR GHAVVGVGKI
GNIFAERGLT ESFPTRDNEQ GVDRTLAVLR TFPSGLVFTN LIEFDMLYGH RNDAHGYAAA
LAAFDRRLPE ILGALATEDL LVLTADHGCD PTTAGTDHTR EYVPLLALGP RLRGGVDLGT
RASLADVAAT VAEVFGFGWP VGTSFYGRLV PEGGGRP