Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daud_1272 |
Symbol | |
ID | 6027671 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Desulforudis audaxviator MP104C |
Kingdom | Bacteria |
Replicon accession | NC_010424 |
Strand | + |
Start bp | 1336632 |
End bp | 1337192 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641594089 |
Product | ECF subfamily RNA polymerase sigma-24 factor |
Protein accession | YP_001717415 |
Protein GI | 169831433 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0325871 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGTTTG AATTCTTAAA ACGGAGACTG GTGGCGCGCG ACATCCAAGC CCTTGAGGAG CTGTTTAACC AGTTCCACGA GACGGTTTAC AAATCGGCTT ACTTTATCAC TCACGACCGG ATGCTGGCGG AGGACGTGGT CCAGAATACT TTTCTGAAGG CATATGATAA AATTGACCAG TTGAAGGATT CCTCCCGGGT CGAATCGTGG TTGATCCAGA TCGCGGTCAA CCAGGCCCGG GACGAGATAA GGCGCCGGCA CCGGCAGGCC TGGTCCCAGG AGGAAGCCCA TCTGCCCGGC CCCCCGGAAG AACTGCCGGA GTTCCAGGTG GTAGCCCGGG AAGAGCACGC GGTGATCAGC GCCGCGATCG ACGGTCTGGC CGCCGAGTAC CAGGACGTGA TCCTGCTCAA GTATCAATTC GAAATGACAA CCAAAAGAAT TGCCGAAACC CTGAACATTC CGGAGGGCAC GGTCAAGACC CGGCTCCGGA AGGCCCGCGC GATCCTGGAG AGTGTGCTCC GGGAATCAGG TTTCGCCGAA CAAAAGGTGG AAGGGGGGTG A
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Protein sequence | MAFEFLKRRL VARDIQALEE LFNQFHETVY KSAYFITHDR MLAEDVVQNT FLKAYDKIDQ LKDSSRVESW LIQIAVNQAR DEIRRRHRQA WSQEEAHLPG PPEELPEFQV VAREEHAVIS AAIDGLAAEY QDVILLKYQF EMTTKRIAET LNIPEGTVKT RLRKARAILE SVLRESGFAE QKVEGG
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