Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daud_1240 |
Symbol | ddl |
ID | 6025696 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Desulforudis audaxviator MP104C |
Kingdom | Bacteria |
Replicon accession | NC_010424 |
Strand | - |
Start bp | 1299198 |
End bp | 1300118 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641594056 |
Product | D-alanine--D-alanine ligase |
Protein accession | YP_001717383 |
Protein GI | 169831401 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGTGCGTA GAATTGGGGT GCTGATGGGC GGTCTATCCG CGGAGCGGGA AGTCTCGCTG AGAAGCGGCC GGGCGGTCTG CGCCGCCCTG GAGTCCAGGG GATACGAGGT GGTGCCGATC GACGTGAACC GGGACGTAGC TCGGACGGTG CGGGAGACCG GGATCGAGCT GGCCTTCATC GCCCTGCACG GTCCGCTGGG CGAAGACGGG GCCGTCCAGG GGCTCCTGGA GGTACTGGGC ATCCCCTACA CCGGCTCGGG GGTCCTGGCC AGCGCCCTGG CCATGGACAA AATCGCCACC AAGAAAATTC TGGCCCACGC CGGACTGCCG GTTCCGGAAT ACCGGGAACT GGAGGCGGGC GATGCGGACA GCGCCCGGGC TGTGGTCGCC GAACTGGGGC TGCCCGTGGT GGTGAAGGCG CCCACGCAGG GTTCCTCGAT CGGGGTGTAC ATCGTCGAGC GGGAGGAGGA CCTCGAGGCA CGCATTACGG ATGCCGTCGC CTACGGGGGA ACCCGGGTCC TGGTTGAGAA GTTTATCGCG GGCCCGGAAC TCACGGCGGC GGTACTCGGC AACCGTGAAC CGCGGGTGCT GCCCCTGATT GAAATTGTTT CGGCGACGGG AAAATACGAT TACGAGTCCA AGTACACGCC GGGCCTGAGC GACCACCTGA TCCCGCCGCG CGTGCCCCGG GAGGTCCAGG AGCGGGTGTC GGATCTGGCC TTGCGGGCTT ACCGGGCCCT GGGTTGCCGG GGTTTTGCCC GGGTGGACCT GATCGTTTCG GGCAATGAAG CGTTCATTCT GGAGATCAAT ACCATTCCAG GCCTGACCGA CGTGAGCCTG TTCCCCGACG CCGCGCGGGC GGCCGGGATG TCTTTTCCCG ACCTGGTTGA GCACCTGGTG CGGTTGGCCC AGGAAAGATA A
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Protein sequence | MVRRIGVLMG GLSAEREVSL RSGRAVCAAL ESRGYEVVPI DVNRDVARTV RETGIELAFI ALHGPLGEDG AVQGLLEVLG IPYTGSGVLA SALAMDKIAT KKILAHAGLP VPEYRELEAG DADSARAVVA ELGLPVVVKA PTQGSSIGVY IVEREEDLEA RITDAVAYGG TRVLVEKFIA GPELTAAVLG NREPRVLPLI EIVSATGKYD YESKYTPGLS DHLIPPRVPR EVQERVSDLA LRAYRALGCR GFARVDLIVS GNEAFILEIN TIPGLTDVSL FPDAARAAGM SFPDLVEHLV RLAQER
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