Gene Daud_1197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_1197 
Symbol 
ID6026801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp1251326 
End bp1251862 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content62% 
IMG OID641594012 
Productnucleoside recognition domain-containing protein 
Protein accessionYP_001717340 
Protein GI169831358 
COG category[S] Function unknown 
COG ID[COG0700] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.966368 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAGAGC TGGTCGGGGC CGTTTCCAAA TGGGCCATTC CCGTGTTTCT TGCCGTGGTC 
CTGATTGCCG GGGCCATCCG TGGGGTCCGC GTGTTCGAGG CCTTCGTGGA GGGCGCCGAG
CAGGGGTTTG GAATGGCGGT CAAGATCATT CCCTATCTGG TGGCGATGGT GGTCGCCATC
AGCGTGTTCC GGGCCTCAGG CGCCATGGAT TGCTTCGTGG GACTGATCTC CCCGCTGCTC
ACCTTCGTGG GCGCTCCACC CGAGATTCTG CCCCACGCGC TGATGCGCCC GCTCTCCGGG
GGTGCCGCCT TGGGGATTGC CACCGAGCTG ATCGAGAAGC ACGGGCCGGA CAGTTTCATC
GGCCTGTTGG TTTCAACGAT GCAGGGTTCG ACGGACACAA CCTTCTACAT TCTCACGCTC
TATTTCGGAG CCGTGGGGGT GAAGCGGTAC CGGTACGCCG TGGCCTCCGG TCTGACGGCG
GATCTGACCA CCCTGCTGGC TTCCATCTTT ATCGCGGGTA TCGTTTTTAG AGGTTAG
 
Protein sequence
MLELVGAVSK WAIPVFLAVV LIAGAIRGVR VFEAFVEGAE QGFGMAVKII PYLVAMVVAI 
SVFRASGAMD CFVGLISPLL TFVGAPPEIL PHALMRPLSG GAALGIATEL IEKHGPDSFI
GLLVSTMQGS TDTTFYILTL YFGAVGVKRY RYAVASGLTA DLTTLLASIF IAGIVFRG