| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1186 |
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| Symbol | |
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| ID | 6026842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Desulforudis audaxviator MP104C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010424 |
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| Strand | - |
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| Start bp | 1241493 |
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| End bp | 1242677 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641594001 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_001717329 |
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| Protein GI | 169831347 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0133] Tryptophan synthase beta chain |
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| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00284462 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCTGC CGGACGAGAG GGGATACTTC GGGAGTTACG GGGGTCGCTA TGTTCCCGAA
ACGCTCATGT CGGCCCTCGA GGAACTGCAA CTGGCCTATC TCAACGCCCG TGCGGACAAC
GGTTTCCAGC GAGAATTCGA CTACTACCTG CGGCACTATG TGGGCCGGCC CAGCCCGCTG
CACTTCGCGG CAAACTTGAG CCGTCAGGTC GGGGGTGCCC GGATCTATTT GAAAAGAGAG
GATTTGAACC ATACCGGGGC TCACAAGATC AACAACACCC TTGGGCAGGC GCTCCTGGCC
CGGAGAATGG GCAAGAGGCG GTTGATCGCG GAGACGGGGG CCGGGCAGCA CGGAGTGGCC
ACCGCCACGG CGGCCGCGCT GTTCGGCTTT TCCTGCACCA TTTTCATGGG CACCGAGGAC
GTGCGGCGCC AGGCGCTGAA CGTGTTCCGG ATGCGGCTTC TGGGCGCCGA GGTGGTCGAG
GTGGCCGCGG GGAGCAAAAC CCTGAAAGAT GCAATGAACG AGGCCATCCG CGATTGGGTG
ACCAATGTGG AACACACCTA CTACCTGATC GGTTCAGTGG CCGGACCCCA CCCTTACCCG
CTGATGGTCC GGGAATTCCA GTCCGTCATC GGACGGGAAA CGCGCCGGCA GGTTTATGAG
CTGACCGGCA GCCTGCCGGA TTACGTGGTA GCCTGTGTCG GCGGGGGGTC GAACGCAATG
GGCATCTTCT CGGAGTTCCT TGGGGAGACG AAGGTGCGCC TGGTGGGAGT GGAAGCCGGG
GGACTCGGCC CGGAAACGGG CCGTCACGCG GCGACCCTGT CCTACGGCCG GCCGGGGGTA
CTGCACGGTT CCTTGAGTTA CCTCTTGCAG GATGACCACG GGCAGGTGCT GCCGGTGCAT
TCGGTTTCCG CCGGCCTAGA TTACCCGGGA GTGGGTCCGG AACTCAGCTA CCTGAAGGAT
TCGGGCCGGG TCCTCTTCAC CACCGCCACG GATGCCGAGG CCCTGGACGC TTTTCGCCTA
CTTTGCCAGA CCGAGGGCAT CCTACCCGCG TTGGAAAGCG CCCACGCCGT CGCCGAGGCG
GTGAAGCTGG CCCGAACACT GACACCGGCG TCGTCCATCG TCGTTAATCT CTCGGGCCGG
GGAGACAAAG ACGTCGAGAC AGTAGCGGGG GAGGTGTGGC AATGA
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| Protein sequence | MMLPDERGYF GSYGGRYVPE TLMSALEELQ LAYLNARADN GFQREFDYYL RHYVGRPSPL
HFAANLSRQV GGARIYLKRE DLNHTGAHKI NNTLGQALLA RRMGKRRLIA ETGAGQHGVA
TATAAALFGF SCTIFMGTED VRRQALNVFR MRLLGAEVVE VAAGSKTLKD AMNEAIRDWV
TNVEHTYYLI GSVAGPHPYP LMVREFQSVI GRETRRQVYE LTGSLPDYVV ACVGGGSNAM
GIFSEFLGET KVRLVGVEAG GLGPETGRHA ATLSYGRPGV LHGSLSYLLQ DDHGQVLPVH
SVSAGLDYPG VGPELSYLKD SGRVLFTTAT DAEALDAFRL LCQTEGILPA LESAHAVAEA
VKLARTLTPA SSIVVNLSGR GDKDVETVAG EVWQ
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