| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1154 |
|---|
| Symbol | |
|---|
| ID | 6026587 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | - |
|---|
| Start bp | 1209155 |
|---|
| End bp | 1210891 |
|---|
| Gene Length | 1737 bp |
|---|
| Protein Length | 578 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641593969 |
|---|
| Product | phosphotransferase domain-containing protein |
|---|
| Protein accession | YP_001717297 |
|---|
| Protein GI | 169831315 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1796] DNA polymerase IV (family X) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000251601 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAACA AGCACGTCGC ACGCATTCTG CAGAACATCG GCGACATCCT GGAGATCCGG
GGGGAAAACC CTTTCCGGGT ACGGGCCTAC CGGAGAGCGG CCCATAGCAT CGAGGCGCTG
GGGGTAGACC TGGCCGAACT CCGCCGTGCG GACCGGCTTA CGGATATCCC GGGCGTGGGC
CGGGATCTGG CCGGCAAAAT TACGGAGATA CTGGACACCG GGACGTGTGC ATACTACGAC
CGGCTGATCC GGGAAATCCC CGCCGGAATT GTCCAGTTGC TCACCGTGCC GGGCATCGGT
CCGCGCACGG CCAGAATCCT GTACGAAGAG CTGCAGATCA GCGGGCTGGA CGAACTGGAG
CGCCTCGGCC GGGCAGGGCG CCTGGCCGAG CTGCGCGGCC TGGGTGAAAA GACCCAGAAC
AAGATCCTGA GCGGGCTGGA ACTGGTACGT CGCGGCCGGG AGCGGCTCCC CCTGGGCCGC
GTGTATCCGT TCGCATCCGC CCTGGTGGAG ACCATCCGGG CCGGAGGGGC CCCGGTGGAG
AGGATATCGG TGGCCGGCAG CATCCGGCGG TTCCAGGACA CCGTGAAAGA TGTTGACATC
GTGGCCGCTT CCGGAAAGCC GGAGGCGGTA ATCCGGTTCT TCACCAGGCT GGGCTTTTGG
ACCGAAATTC TGGAGGAAGG GAGCACCCGC GCCGCCGCGC GCACCGAGGA GGGGCTCCGG
GTCGATTTGC GGGTGGTCGA TCCGGCGGTG TACGGGGCGG CCCTGTGCTA TCTGACCGGC
TCCAAGGCTC ACAACATCCG CATGCGCCAG CTGGCGGCGC AAAAAGGCCT GAAGCTTAAC
GAGTACGGCG TGTTCCGGGA CGACCGGTGC ATCGCCGGCG CCGAGGAGGA CGACGTGTTC
GCCGCCCTGG AACTGCCGTT TATTCCTCCG GAACTCCGGG AGGACCACGG TGAAATCGAG
GCCGCTCTGG AGGGCACCCT GCCCCGCCTG GTGGAGAAAA AGGACCTCCG GGGGGACTTT
CACGTCCATT CCGTCTACTC CGACGGCGCG GGCACCCTGG AAGATATCGC CGCCGAAGCG
CTGCGGCTCG GTCTGGAGTG GGTGGGGGTG TGCGACCACT CGCACTCCCT GAAGATCGCC
CGGGGGCTTT CGATCCGCGA TCTCCGTCAG AAGATCGCCG CCGTCCGCGC CTTCAACCAG
CAGAGTACCG GGGTGAAACT GCTGGCCGGC GCGGAGGTGG AGATCGACGC GCACGGGCGG
CTCGACTACC CCGACGAGGT GCTTGCTGAA TTGGATCTGG TGCTCGTCGG AGTGCACACC
GGCTTCGGCC AGGACCGGGA GACGATGACC GCCCGGATCG TCGCGGCACT GCAACACCCG
GCAGTGCACG TGCTGGCCCA CCCGACCGGG CGGCTGCTGG GGGAACGCGC CCCCTACCAG
GTCGACATGG ACCGGGTGAT CGCGGCGGCC GCCCGGGCCA GCACAGCCCT GGAAATCAAC
GCCTATCCGA AACGGCTGGA TCTGGATGAC ATCCACGCCA GGCAAGCCGC AAGGAAGGGG
GCGAAAATGG CGCTCGGCAG CGACGCCCAC CTGGTGGAAC AGATCGGATT TCTGGAACTG
GGCGTGGGCG TAGCCCGGCG GGCCTGGCTG GGACCGGTGG ACGTACTGAA CACGTTGGGC
TGGGCAGAGC TCGGGACCGC TCTGGGTAAA GGAAAATTTC GCTTGTTAAA TGGTTAG
|
|---|
| Protein sequence | MKNKHVARIL QNIGDILEIR GENPFRVRAY RRAAHSIEAL GVDLAELRRA DRLTDIPGVG
RDLAGKITEI LDTGTCAYYD RLIREIPAGI VQLLTVPGIG PRTARILYEE LQISGLDELE
RLGRAGRLAE LRGLGEKTQN KILSGLELVR RGRERLPLGR VYPFASALVE TIRAGGAPVE
RISVAGSIRR FQDTVKDVDI VAASGKPEAV IRFFTRLGFW TEILEEGSTR AAARTEEGLR
VDLRVVDPAV YGAALCYLTG SKAHNIRMRQ LAAQKGLKLN EYGVFRDDRC IAGAEEDDVF
AALELPFIPP ELREDHGEIE AALEGTLPRL VEKKDLRGDF HVHSVYSDGA GTLEDIAAEA
LRLGLEWVGV CDHSHSLKIA RGLSIRDLRQ KIAAVRAFNQ QSTGVKLLAG AEVEIDAHGR
LDYPDEVLAE LDLVLVGVHT GFGQDRETMT ARIVAALQHP AVHVLAHPTG RLLGERAPYQ
VDMDRVIAAA ARASTALEIN AYPKRLDLDD IHARQAARKG AKMALGSDAH LVEQIGFLEL
GVGVARRAWL GPVDVLNTLG WAELGTALGK GKFRLLNG
|
|---|
| |