| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1128 |
|---|
| Symbol | |
|---|
| ID | 6025526 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | - |
|---|
| Start bp | 1184365 |
|---|
| End bp | 1185135 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641593943 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001717271 |
|---|
| Protein GI | 169831289 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.79034 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGAGG TGCTGCTTGA ACTGGAAAGC GTAACGGTGA ACTTCGGCGG GCTCACCGCG
GTGCACCGGT TGGACATGAA TATCGAATCC GGCTCCATCA GGGCCCTCAT TGGCCCCAAC
GGGGCGGGGA AGACCACGGT CTTCAACGTG GTGACCGGCA TTTTCCGCCC GACCTCCGGG
AGCATCCGTT TCCGCGGCCG GGAGATCACG CGCCTGAATC CCTACGACAT CGCCGCCGCC
GGGATTGCGC GCACCTTCCA GAACATCCGC CTGTTCAAGA ACGCCTCGGT GCTGGACAAT
GTCAAGGTCG GGCGTCATTC CCGAGGAAAA AGCAACGTCC TGGGTGCGCT CATCCGCCAT
CCGGGGTTTA AGGCCGAGGA GCGGGACACT ACCGAGGCAT CCCTCGCGGC CCTGGAACTG
GTGGGGCTTT CACGCAAGAA GGACGAACTG GCCAAAAACC TCTCCTACGG GGAGCAGCGG
CGTCTGGAAA TCGCGCGCGG CCTGGTGTCC GAGCCAGCGT TGCTTCTGCT CGACGAACCC
GCCGCCGGCA TGAACCCGCA GGAAAAGCAA AGCCTCTTAC AGCTGATCAA GAGGATTCAG
GAACAGGGCA TCACCATCTT CCTGGTGGAG CACGACATGA AATTTGTCAT GACCCTCTCC
CAGAAGATCA CCGTACTGGA CTACGGCCGG GAAATCTGCA CCGGGACCCC GGCGGAGGTT
CAGGCCGACC CGCGGGTGAT CGAGGCTTAC CTGGGAAAGG AGGTGGGGTA G
|
|---|
| Protein sequence | MSEVLLELES VTVNFGGLTA VHRLDMNIES GSIRALIGPN GAGKTTVFNV VTGIFRPTSG
SIRFRGREIT RLNPYDIAAA GIARTFQNIR LFKNASVLDN VKVGRHSRGK SNVLGALIRH
PGFKAEERDT TEASLAALEL VGLSRKKDEL AKNLSYGEQR RLEIARGLVS EPALLLLDEP
AAGMNPQEKQ SLLQLIKRIQ EQGITIFLVE HDMKFVMTLS QKITVLDYGR EICTGTPAEV
QADPRVIEAY LGKEVG
|
|---|
| |